RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 TGFBIQ15582 683 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 AARS2Q5JTZ9 985 aaKnown RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 RETREG3Q86VR2 466 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 TRPM7Q96QT4 1865 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 COL6A1P12109 1028 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 RECQLP46063 649 aaPredicted RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 HK2P52789 917 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 RPL38P63173 70 aaKnown RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 SLC44A4Q53GD3 710 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 OTUD3Q5T2D3 398 aaPredicted RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 RFLNAQ6ZTI6 216 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 CYGBQ8WWM9 190 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 COQ10BQ9H8M1 238 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 IPPKQ9H8X2 491 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 SLAMF8Q9P0V8 285 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 PCDHGB4Q9UN71 923 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 VPS9D1Q9Y2B5 631 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 POLR3HQ9Y535 204 aaPredicted RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 PCDHGB5Q9Y5G0 923 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 MIA3Q5JRA6 1907 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 LCHNA4D1U4 455 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 GMNNO75496 209 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 SOD2P04179 222 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 CD70P32970 193 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 ATP6V0D1P61421 351 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 ADGRE1Q14246 886 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 CHRNA6Q15825 494 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 THUMPD3Q9BV44 507 aaKnown RBP16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 TUBB1Q9H4B7 451 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 INTS10Q9NVR2 710 aaKnown RBP16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 HCFC1R1Q9NWW0 138 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 IL37Q9NZH6 218 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 PHF24Q9UPV7 400 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 ARIH1Q9Y4X5 557 aaPredicted RBP16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 NYNRINQ9P2P1 1898 aaKnown RBP16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 TSC2P49815 1807 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 CXCL14O95715 111 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 CCL5P13501 91 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 PBLDP30039 288 aaPredicted RBP16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 IL1RL1Q01638 556 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 TLR1Q15399 786 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 AAK1Q2M2I8 961 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 ELMOD1Q8N336 334 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 CENPKQ9BS16 269 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 TMEM79Q9BSE2 394 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 MTG2Q9H4K7 406 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 THEGQ9P2T0 379 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 SLCO3A1Q9UIG8 710 aa16.9■□□□□ 0.3
EPB41L3-204ENST00000540638 ARTNQ5T4W7 220 aa16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 LARP4Q71RC2 724 aaKnown RBP eCLIP16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 CPSF7Q8N684 471 aaKnown RBP16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 TRIML2Q8N7C3 387 aa16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 HMGCLL1Q8TB92 370 aa16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 VPS50Q96JG6 964 aa16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 GID8Q9NWU2 228 aa16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 USP22Q9UPT9 525 aa16.89■□□□□ 0.3
EPB41L3-204ENST00000540638 KANSL1LA0AUZ9 987 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 TRIM24O15164 1050 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 C8AP07357 584 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 ZDHHC11BP0C7U3 371 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 RBBP5Q15291 538 aaKnown RBP16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 PLPP4Q5VZY2 271 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 FBXL19Q6PCT2 694 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 FUNDC1Q8IVP5 155 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 ADGRG2Q8IZP9 1017 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 C2orf15Q8WU43 125 aaKnown RBP16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 SORCS1Q8WY21 1168 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 ING5Q8WYH8 240 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 NCLNQ969V3 563 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 TEX37Q96LM6 180 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 TRIB3Q96RU7 358 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 ACTR8Q9H981 624 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 C6orf203Q9P0P8 240 aaPredicted RBP16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 H3BNC9 293 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 OR6B1O95007 311 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 ZXDBP98169 803 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 CTSL3PQ5NE16 218 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 SATL1Q86VE3 508 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 KCTD14Q9BQ13 255 aaPredicted RBP16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 RIC8BQ9NVN3 520 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 PDP2Q9P2J9 529 aa16.89■□□□□ 0.29
EPB41L3-204ENST00000540638 GLYATL1P3A0A0U1RQE8 302 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 RFPL2O75678 378 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 BCAS2O75934 225 aaPredicted RBP16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 IL10P22301 178 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 MTPNP58546 118 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 YBX1P67809 324 aaKnown RBP16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 PPP1R8Q12972 351 aaKnown RBP16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 SLC2A7Q6PXP3 512 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 CD200R1Q8TD46 325 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 BIRC8Q96P09 236 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 KLF16Q9BXK1 252 aaPredicted RBP16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 DERL2Q9GZP9 239 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 ARL15Q9NXU5 204 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 DOCK6Q96HP0 2047 aa16.88■□□□□ 0.29
EPB41L3-204ENST00000540638 GSTA4O15217 222 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms