RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 MAXP61244 160 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 DYNLT1P63172 113 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 DHX9Q08211 1270 aaKnown RBP8.8□□□□□ -1
TRAPPC1-202ENST00000540486 PPIDQ08752 370 aaKnown RBP8.8□□□□□ -1
TRAPPC1-202ENST00000540486 MAP7Q14244 749 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 IFI16Q16666 785 aaKnown RBP8.8□□□□□ -1
TRAPPC1-202ENST00000540486 AMZ1Q400G9 498 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 TFDP3Q5H9I0 405 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 TMCO4Q5TGY1 634 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 MARC1Q5VT66 337 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 ANKS6Q68DC2 871 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 CEACAM20Q6UY09 585 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 RD3Q7Z3Z2 195 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 ATPAF2Q8N5M1 289 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 ESX1Q8N693 406 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 CNTD1Q8N815 330 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 FAM46DQ8NEK8 389 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 OR4D9Q8NGE8 314 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 ATL2Q8NHH9 583 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 FATE1Q969F0 183 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 TSACCQ96A04 125 aaPredicted RBP8.8□□□□□ -1
TRAPPC1-202ENST00000540486 HDAC11Q96DB2 347 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 HES6Q96HZ4 224 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 OLFM3Q96PB7 478 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 RBM15Q96T37 977 aaKnown RBP eCLIP8.8□□□□□ -1
TRAPPC1-202ENST00000540486 MGME1Q9BQP7 344 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 CINPQ9BW66 212 aaPredicted RBP8.8□□□□□ -1
TRAPPC1-202ENST00000540486 C1QTNF7Q9BXJ2 289 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 HEMGNQ9BXL5 484 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 NOD2Q9HC29 1040 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 MLXIPLQ9NP71 852 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 MRPL40Q9NQ50 206 aaKnown RBP8.8□□□□□ -1
TRAPPC1-202ENST00000540486 LATS2Q9NRM7 1088 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 AMFRQ9UKV5 643 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 PCDHGB7Q9Y5F8 929 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 HEY1Q9Y5J3 304 aa8.8□□□□□ -1
TRAPPC1-202ENST00000540486 CCDC66A2RUB6 948 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 NEMP1O14524 444 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 AREL1O15033 823 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 KRT86O43790 486 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 FTCDO95954 541 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 TNFP01375 233 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 JCHAINP01591 159 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 CCDC175P0C221 793 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 CCNB1P14635 433 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ZFXP17010 805 aaPredicted RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 MX2P20592 715 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ALDH4A1P30038 563 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 IGFALSP35858 605 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 STAT5AP42229 794 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 MMP13P45452 471 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 GPR3P46089 330 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 RENBPP51606 427 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 RWDD2BP57060 319 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 OR1D5P58170 312 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 SRP54P61011 504 aaKnown RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 RAD51Q06609 339 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ZBTB17Q13105 803 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 SQSTM1Q13501 440 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 SEMA5AQ13591 1074 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ELOAQ14241 798 aaKnown RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ERV3-1Q14264 604 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 NR1D2Q14995 579 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ZRSR2Q15696 482 aaKnown RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 PPP2R5EQ16537 467 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ALG11Q2TAA5 492 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ODF2Q5BJF6 829 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 PAPD7Q5XG87 772 aaKnown RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 JMJD6Q6NYC1 403 aaPredicted RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 BBS12Q6ZW61 710 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 PEX26Q7Z412 305 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 TTC7BQ86TV6 843 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 HPS6Q86YV9 775 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 SYCE1Q8N0S2 351 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 TXLNBQ8N3L3 684 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 CCNYQ8ND76 341 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ARRDC2Q8TBH0 407 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 HCAR2Q8TDS4 363 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ECHDC3Q96DC8 303 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 RBM41Q96IZ5 413 aaKnown RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ZNF641Q96N77 438 aaPredicted RBP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 NUDCD1Q96RS6 583 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 TUBGCP5Q96RT8 1024 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 NUDT22Q9BRQ3 303 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 SLC25A23Q9BV35 468 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 OSBPL1AQ9BXW6 950 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 NT5MQ9NPB1 228 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 LZTFL1Q9NQ48 299 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 RBM22Q9NW64 420 aaKnown RBP eCLIP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 OCIAD1Q9NX40 245 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 EFR3BQ9Y2G0 817 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 ATP8A1Q9Y2Q0 1164 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.79□□□□□ -1
TRAPPC1-202ENST00000540486 PCDHGC4Q9Y5F7 938 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 RPS6KL1Q9Y6S9 549 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 DGKBQ9Y6T7 804 aa8.79□□□□□ -1
TRAPPC1-202ENST00000540486 POLEQ07864 2286 aa8.78□□□□□ -1
TRAPPC1-202ENST00000540486 TSPAN11A1L157 253 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms