RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 SNX12Q9UMY4 172 aa11.29□□□□□ -0.6
TMEM258-205ENST00000540434 SLC17A4Q9Y2C5 497 aa11.29□□□□□ -0.6
TMEM258-205ENST00000540434 NEU2Q9Y3R4 380 aa11.29□□□□□ -0.6
TMEM258-205ENST00000540434 ZNF106Q9H2Y7 1883 aaKnown RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CCDC78A2IDD5 438 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 LMO7DNF2Z398 122 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 TNFRSF10CO14798 259 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 RASGRP1O95267 797 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 AP2A1O95782 977 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 TNFP01375 233 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 FGF1P05230 155 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 ADCY8P40145 1251 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 GNPDA1P46926 289 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CDKN1CP49918 316 aaPredicted RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 TERF1P54274 439 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 GNG11P61952 73 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CYP4F2P78329 520 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 TMPRSS15P98073 1019 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 XIAPP98170 497 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CLCA4Q14CN2 919 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 P3H1Q32P28 736 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CERCAMQ5T4B2 595 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CCDC70Q6NSX1 233 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CLEC14AQ86T13 490 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 SLC35F3Q8IY50 421 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 OR4K2Q8NGD2 314 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 OR52K1Q8NGK4 314 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CCHCR1Q8TD31 782 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 PATE1Q8WXA2 126 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 LIN37Q96GY3 246 aaPredicted RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 PBKQ96KB5 322 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 BOCQ9BWV1 1114 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 SPATA16Q9BXB7 569 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 FSD1LQ9BXM9 530 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 FRMD8P1Q9BZ68 369 aaPredicted RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 SLC13A1Q9BZW2 595 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CARS2Q9HA77 564 aaKnown RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 PHPT1Q9NRX4 125 aaPredicted RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 NLGN3Q9NZ94 848 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 NFKBIL1Q9UBC1 381 aaPredicted RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 SPASTQ9UBP0 616 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 PLEKHB1Q9UF11 243 aaPredicted RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 FKBPLQ9UIM3 349 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 AAR2Q9Y312 384 aaKnown RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 PCDHGA8Q9Y5G5 932 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 ENTPD2Q9Y5L3 495 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 CSNK1G3Q9Y6M4 447 aa11.28□□□□□ -0.6
TMEM258-205ENST00000540434 ZFC3H1O60293 1989 aaKnown RBP11.28□□□□□ -0.6
TMEM258-205ENST00000540434 SPTBN1Q01082 2364 aaKnown RBP11.27□□□□□ -0.6
TMEM258-205ENST00000540434 LRBAP50851 2863 aa11.27□□□□□ -0.6
TMEM258-205ENST00000540434 RGSL1A5PLK6 1076 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 KIF5CO60282 957 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 STK10O94804 968 aaKnown RBP11.27□□□□□ -0.61
TMEM258-205ENST00000540434 CTSEP14091 401 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 ZNF8P17098 575 aaPredicted RBP11.27□□□□□ -0.61
TMEM258-205ENST00000540434 NFKBIAP25963 317 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 HTR1BP28222 390 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 COILP38432 576 aaPredicted RBP11.27□□□□□ -0.61
TMEM258-205ENST00000540434 RIPPLY3P57055 190 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 DCDC1P59894 354 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 CTBSQ01459 385 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 SEMA5AQ13591 1074 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 PEX6Q13608 980 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 PRPSAP1Q14558 356 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 TBR1Q16650 682 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 CYP1B1Q16678 543 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 CCDC38Q502W7 563 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 PYCR3Q53H96 274 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 PERM1Q5SV97 790 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 PAPD7Q5XG87 772 aaKnown RBP11.27□□□□□ -0.61
TMEM258-205ENST00000540434 GUSBP11Q6P575 273 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 FAM151BQ6UXP7 276 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 GLT6D1Q7Z4J2 308 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 ADGRG6Q86SQ4 1221 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 CREG2Q8IUH2 290 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 RAVER1Q8IY67 606 aaKnown RBP11.27□□□□□ -0.61
TMEM258-205ENST00000540434 TRAM1L1Q8N609 369 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 BRSK1Q8TDC3 778 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 GPBAR1Q8TDU6 330 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 BTN2A2Q8WVV5 523 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 ZNF778Q96MU6 729 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 FAM96AQ9H5X1 160 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 KCTD5Q9NXV2 234 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 SIRPGQ9P1W8 387 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 SLC23A2Q9UGH3 650 aa11.27□□□□□ -0.61
TMEM258-205ENST00000540434 ITPR3Q14573 2671 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 H3BM21 787 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 NOBOXO60393 691 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 PPFIA2O75334 1257 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 SUN1O94901 812 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 ASMTLO95671 621 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 IVLP07476 585 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 VPS41P49754 854 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 ARSDP51689 593 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 ZNF140P52738 457 aaPredicted RBP11.26□□□□□ -0.61
TMEM258-205ENST00000540434 POU6F1Q14863 301 aa11.26□□□□□ -0.61
TMEM258-205ENST00000540434 TAF1AQ15573 450 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms