RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
C11orf54-214ENST00000540113 RPL26P61254 145 aaKnown RBP11.41□□□□□ -0.58
C11orf54-214ENST00000540113 PRKCQQ04759 706 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 MYLK3Q32MK0 819 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
C11orf54-214ENST00000540113 TMCO2Q7Z6W1 182 aaPredicted RBP11.41□□□□□ -0.58
C11orf54-214ENST00000540113 TMEM126BQ8IUX1 230 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 OR2T34Q8NGX1 318 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 OR2T3Q8NH03 318 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 CD200R1Q8TD46 325 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 PBXIP1Q96AQ6 731 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 LRRC58Q96CX6 371 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 VWCEQ96DN2 955 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 CEP295NLQ96MC4 621 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 SLC22A12Q96S37 553 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 TMEM79Q9BSE2 394 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 KLF16Q9BXK1 252 aaPredicted RBP11.41□□□□□ -0.58
C11orf54-214ENST00000540113 TM6SF2Q9BZW4 377 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 HIPK3Q9H422 1215 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 PAK6Q9NQU5 681 aaPredicted RBP11.41□□□□□ -0.58
C11orf54-214ENST00000540113 TRMT6Q9UJA5 497 aaKnown RBP11.41□□□□□ -0.58
C11orf54-214ENST00000540113 YIPF1Q9Y548 306 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 PCDHB9Q9Y5E1 797 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 GPR45Q9Y5Y3 372 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 OAS3Q9Y6K5 1087 aaKnown RBP11.41□□□□□ -0.58
C11orf54-214ENST00000540113 OBSL1O75147 1896 aa11.41□□□□□ -0.58
C11orf54-214ENST00000540113 E5RI56 91 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 VILLO15195 856 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 VPS26AO75436 327 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 KATNA1O75449 491 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 C1RP00736 705 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 RPS17P08708 135 aaKnown RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ZFP36L2P47974 494 aaKnown RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 HTR6P50406 440 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 LAMB3Q13751 1172 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 TBCELQ5QJ74 424 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 CHST9Q7L1S5 443 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 WFDC5Q8TCV5 224 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ROPN1LQ96C74 230 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 MYRFLQ96LU7 910 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 SLC2A11Q9BYW1 496 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 RETREG1Q9H6L5 497 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 SLC52A3Q9NQ40 469 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 MRPL40Q9NQ50 206 aaKnown RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 SDR39U1Q9NRG7 319 aaPredicted RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 TRPM5Q9NZQ8 1165 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 A0A1B0GVM2 712 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 SNX2O60749 519 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 TNFAIP8O95379 198 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 CYBBP04839 570 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 IL12AP29459 219 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 PLOD1Q02809 727 aaPredicted RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 NFYCQ13952 458 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 TIGD2Q4W5G0 525 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ADGRF1Q5T601 910 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 BLOC1S3Q6QNY0 202 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 HACD2Q6Y1H2 254 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ZBTB49Q6ZSB9 765 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 TMEM150AQ86TG1 271 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 GPSM1Q86YR5 675 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 MFN1Q8IWA4 741 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 CHERPQ8IWX8 916 aaKnown RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ZNF461Q8TAF7 563 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ZFRQ96KR1 1074 aaKnown RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ZNF597Q96LX8 424 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ASB2Q96Q27 587 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 BOCQ9BWV1 1114 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 CAAP1Q9H8G2 361 aa11.4□□□□□ -0.58
C11orf54-214ENST00000540113 INTS7Q9NVH2 962 aaKnown RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 ZFC3H1O60293 1989 aaKnown RBP11.4□□□□□ -0.58
C11orf54-214ENST00000540113 H0Y626 953 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 HTRA2O43464 458 aaPredicted RBP11.39□□□□□ -0.59
C11orf54-214ENST00000540113 TBL1XO60907 577 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 GUCA1CO95843 209 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 GNAO1P09471 354 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 PSMA3P25788 255 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 RPL5P46777 297 aaKnown RBP11.39□□□□□ -0.59
C11orf54-214ENST00000540113 PIK3CGP48736 1102 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 CDH15P55291 814 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 ERVPABLB-1P60509 514 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 IL2P60568 153 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 ATP6V0D1P61421 351 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 KIAA1841Q6NSI8 718 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 FAM151BQ6UXP7 276 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 FAM43BQ6ZT52 329 aaPredicted RBP11.39□□□□□ -0.59
C11orf54-214ENST00000540113 LYSMD3Q7Z3D4 306 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 AHI1Q8N157 1196 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 ZFP28Q8NHY6 868 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 AUTS2Q8WXX7 1259 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 TOP1MTQ969P6 601 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 TMIGD2Q96BF3 282 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 MPP4Q96JB8 637 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 DEFB118Q96PH6 123 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 E2F3O00716 465 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 ARPC2O15144 300 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 INPP4BO15327 924 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 STAMBPO95630 424 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 CLIC3O95833 236 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 PYGLP06737 847 aa11.39□□□□□ -0.59
C11orf54-214ENST00000540113 CNPP09543 421 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms