RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 RRM2P31350 389 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 MAPKAPK2P49137 400 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 RPS7P62081 194 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 GSTM4Q03013 218 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SLC18A2Q05940 514 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 MGAT5Q09328 741 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ELP6Q0PNE2 266 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 FSCN1Q16658 493 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 GNASQ5JWF2 1037 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CYP4Z1Q86W10 505 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 KIF18BQ86Y91 864 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 DCP2Q8IU60 420 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 KRT78Q8N1N4 520 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SDR16C5Q8N3Y7 309 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 MMP27Q9H306 513 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 BRD9Q9H8M2 597 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 KLF15Q9UIH9 416 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CDH22Q9UJ99 828 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF225Q9UK10 706 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 HSPB11Q9Y547 144 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 KCNE2Q9Y6J6 123 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SYNDIG1LA6NDD5 238 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 E5RJQ4 531 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 GCATO75600 419 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TSPAN19P0C672 248 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 HOXA11P31270 313 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 UQCRC1P31930 480 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ETFRF1Q6IPR1 90 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CNSTQ6PJW8 725 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TRABD2AQ86V40 505 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 C10orf107Q8IVU9 208 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 NAT8LQ8N9F0 302 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 C3orf58Q8NDZ4 430 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 JOSD2Q8TAC2 188 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SKA2Q8WVK7 121 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 VAT1Q99536 393 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 DUSP16Q9BY84 665 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 FAM49AQ9H0Q0 323 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 LRRC4Q9HBW1 653 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SPAG4Q9NPE6 437 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ACTR3BQ9P1U1 418 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 NFKBIL1Q9UBC1 381 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 POFUT2Q9Y2G5 429 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SMIM28A0A1B0GU29 152 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 C9IYK1 514 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 UBDO15205 165 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 PSIP1O75475 530 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SOAT2O75908 522 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ECDO95905 644 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CFHP08603 1231 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 NPR2P20594 1047 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 NOS2P35228 1153 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 NUDT1P36639 197 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 MATKP42679 507 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 DPYSL3Q14195 570 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 RBBP7Q16576 425 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 PLEKHG6Q3KR16 790 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 FAM76BQ5HYJ3 339 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 FAM131AQ6UXB0 335 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 THAP5Q7Z6K1 395 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 PDSS2Q86YH6 399 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 GRAMD2AQ8IUY3 354 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 LNX2Q8N448 690 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TMEM121Q9BTD3 319 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SLC22A4Q9H015 551 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 KAT8Q9H7Z6 458 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 EIF3LQ9Y262 564 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ANKRD34BA5PLL1 514 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 HMGN1P05114 100 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 IQCF3P0C7M6 154 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF182P17025 639 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CDH4P55283 916 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 RAB4BP61018 213 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 KIZQ2M2Z5 673 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 PXDC1Q5TGL8 231 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 KHDRBS2Q5VWX1 349 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CHADLQ6NUI6 762 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF317Q96PQ6 595 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 PSKH2Q96QS6 385 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CDK5RAP1Q96SZ6 601 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 LRRC40Q9H9A6 602 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 MAN1C1Q9NR34 630 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TMEM45AQ9NWC5 275 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TMEM161AQ9NX61 479 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SIRPGQ9P1W8 387 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 A0A1W2PPM1 405 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 DYRK3O43781 588 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CLPXO76031 633 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 FADS2O95864 444 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 DDX6P26196 483 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 NFYCQ13952 458 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 FAM214AQ32MH5 1076 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SLC25A52Q3SY17 297 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 GLRA4Q5JXX5 417 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 FAXCQ5TGI0 409 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ADGRD1Q6QNK2 874 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CADM2Q8N3J6 435 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms