RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CTSEP14091 401 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 CSRP1P21291 193 aaKnown RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 ACRV1P26436 265 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 CDKN1CP49918 316 aaPredicted RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 CTSCP53634 463 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 B4GALNT1Q00973 533 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 CACNG1Q06432 222 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 TMEM115Q12893 351 aaPredicted RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 C1orf61Q13536 156 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 LRP8Q14114 963 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SEMA3AQ14563 771 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 TCEA2Q15560 299 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 DEFB133Q30KQ1 61 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 PROX2Q3B8N5 592 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 MSS51Q4VC12 460 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 ZRANB3Q5FWF4 1079 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 FNBP1LQ5T0N5 605 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 C6orf132Q5T0Z8 1188 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 KIAA0930Q6ICG6 404 aaPredicted RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 ZCCHC8Q6NZY4 707 aaKnown RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 C11orf96Q7Z7L8 435 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 CTAGE6Q86UF2 777 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SERPINA9Q86WD7 417 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 NRROSQ86YC3 692 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 GALNT13Q8IUC8 556 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 ZNF547Q8IVP9 402 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 CTAGE4Q8IX94 777 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 PIANPQ8IYJ0 282 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SDR16C5Q8N3Y7 309 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 MMGT1Q8N4V1 131 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 EID2Q8N6I1 236 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 NOA1Q8NC60 698 aaKnown RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 MNS1Q8NEH6 495 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 DEFB124Q8NES8 71 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 CCL4L1Q8NHW4 92 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 GDAP1Q8TB36 358 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 GPBAR1Q8TDU6 330 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 RHBDD1Q8TEB9 315 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SETD7Q8WTS6 366 aaKnown RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SEC14L1Q92503 715 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 HDAC10Q969S8 669 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 MFSD3Q96ES6 412 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SGSM3Q96HU1 749 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SIGLEC10Q96LC7 697 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 WDR83Q9BRX9 315 aaKnown RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 LRRC1Q9BTT6 524 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 BOCQ9BWV1 1114 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 ZCCHC2Q9C0B9 1178 aaKnown RBP6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 RAB17Q9H0T7 212 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 DPH5Q9H2P9 285 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 FAM96AQ9H5X1 160 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SAMD15Q9P1V8 674 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 WHRNQ9P202 907 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 CRLS1Q9UJA2 301 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 ANAPC5Q9UJX4 755 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 SNX24Q9Y343 169 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 PRKAB1Q9Y478 270 aa6.89□□□□□ -1.31
LPCAT3-209ENST00000540060 WDFY3Q8IZQ1 3526 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 LY6G6EA0A0G2JKS1 128 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ZCWPW2A0A1B0GU75 182 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 NEMP2A6NFY4 417 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 SDR42E2A6NKP2 422 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 OR2AG2A6NM03 316 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ESPNB1AK53 854 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 E7ESA3 106 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 YY2O15391 372 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 GRID2O43424 1007 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 SIGLEC6O43699 453 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 SGTAO43765 313 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 USP1O94782 785 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CDK14O94921 469 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 KCNK5O95279 499 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ANXA6P08133 673 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ALPPL2P10696 532 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ACP5P13686 325 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CEACAM1P13688 526 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PGAM1P18669 254 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 MSH3P20585 1137 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 AK4P27144 223 aaPredicted RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 AKT1P31749 480 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ARCN1P48444 511 aaKnown RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PRLHRP49683 370 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 NOVA1P51513 510 aaKnown RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PRAMEP78395 509 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 FOXK1P85037 733 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CTBSQ01459 385 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 SLC7A5Q01650 507 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 DHX9Q08211 1270 aaKnown RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ILF3Q12906 894 aaKnown RBP eCLIP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CALCOCO2Q13137 446 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CBLBQ13191 982 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ITIH4Q14624 930 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 DBN1Q16643 649 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 HIF1AQ16665 826 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PLA2G4EQ3MJ16 856 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 DNAJC21Q5F1R6 531 aaKnown RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CASC4Q6P4E1 433 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 LVRNQ6Q4G3 990 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CRTC3Q6UUV7 619 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms