RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 PRMT5O14744 637 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 TNFRSF10CO14798 259 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 BCAT2O15382 392 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 FOXD2O60548 495 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 BANF1O75531 89 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 CDK14O94921 469 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 ZWINTO95229 277 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 ESR1P03372 595 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 ERVK-10P10266 1014 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 FOXN2P32314 431 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 SKIV2L2P42285 1042 aaKnown RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 CD151P48509 253 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 IL9RQ01113 521 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 GUCY1A3Q02108 690 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 PLOD1Q02809 727 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 DNAJC3Q13217 504 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 NFATC4Q14934 902 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 PTPRRQ15256 657 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 KCTD19Q17RG1 926 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 TYSND1Q2T9J0 566 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 PLK5Q496M5 336 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 GPRC6AQ5T6X5 926 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 PTRHD1Q6GMV3 140 aaKnown RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 PRR23BQ6ZRT6 265 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 MARK2Q7KZI7 788 aaKnown RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 ABI3BPQ7Z7G0 1075 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 SERPINA9Q86WD7 417 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 CILP2Q8IUL8 1156 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 SYT12Q8IV01 421 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 IGDCC3Q8IVU1 814 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 PPM1NQ8N819 430 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 C2CD4AQ8NCU7 369 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 KLK6Q92876 244 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 WDR92Q96MX6 357 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 FCRL3Q96P31 734 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 SMIM14Q96QK8 99 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 SMC6Q96SB8 1091 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 CCT8L2Q96SF2 557 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 KLF6Q99612 283 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 ZDHHC5Q9C0B5 715 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 SUDS3Q9H7L9 328 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 EIF2B4Q9UI10 523 aaKnown RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 MBD1Q9UIS9 605 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 ZNF180Q9UJW8 692 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 GPR34Q9UPC5 381 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 PCDHGA5Q9Y5G8 931 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 DNMT3AQ9Y6K1 912 aaPredicted RBP10.13□□□□□ -0.79
CLPB-210ENST00000539148 ZNF318Q5VUA4 2279 aa10.13□□□□□ -0.79
CLPB-210ENST00000539148 ERICH4A6NGS2 130 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 E5RI56 91 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 H3BM21 787 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 VILLO15195 856 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 TM9SF1O15321 606 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 YKT6O15498 198 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 LILRB5O75023 590 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 ATP1B2P14415 290 aaPredicted RBP10.12□□□□□ -0.79
CLPB-210ENST00000539148 BRAFP15056 766 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 RPS3P23396 243 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLPB-210ENST00000539148 IGFALSP35858 605 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 MAPK9P45984 424 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 LEPRP48357 1165 aaKnown RBP10.12□□□□□ -0.79
CLPB-210ENST00000539148 ARSDP51689 593 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 HNRNPH2P55795 449 aaKnown RBP10.12□□□□□ -0.79
CLPB-210ENST00000539148 GPX6P59796 221 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 PFN3P60673 137 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 CDK3Q00526 305 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 TMEM115Q12893 351 aaPredicted RBP10.12□□□□□ -0.79
CLPB-210ENST00000539148 LRP8Q14114 963 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 PTPRCAPQ14761 206 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 TMED2Q15363 201 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 DUOXA1Q1HG43 343 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 TTLL9Q3SXZ7 439 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 KBTBD12Q3ZCT8 623 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 TEDDM1Q5T9Z0 273 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 LRRC8EQ6NSJ5 796 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 ADGRD1Q6QNK2 874 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 IL27RAQ6UWB1 636 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 MACC1Q6ZN28 852 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 Q6ZSR6 202 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 STRA8Q7Z7C7 330 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 EXOC3L1Q86VI1 746 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 AGGF1Q8N302 714 aaeCLIP10.12□□□□□ -0.79
CLPB-210ENST00000539148 SDR16C5Q8N3Y7 309 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 TMEM145Q8NBT3 493 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 EPS8L3Q8TE67 593 aaKnown RBP10.12□□□□□ -0.79
CLPB-210ENST00000539148 SELENOSQ9BQE4 189 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 RHOJQ9H4E5 214 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 CD93Q9NPY3 652 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 EURLQ9NYK6 297 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
CLPB-210ENST00000539148 ZFC3H1O60293 1989 aaKnown RBP10.12□□□□□ -0.79
CLPB-210ENST00000539148 IGLV3-16A0A075B6K0 115 aa10.11□□□□□ -0.79
CLPB-210ENST00000539148 C10orf142B7Z368 130 aa10.11□□□□□ -0.79
CLPB-210ENST00000539148 POC1B-GALNT4F8VUJ3 575 aa10.11□□□□□ -0.79
CLPB-210ENST00000539148 TLR4O00206 839 aa10.11□□□□□ -0.79
CLPB-210ENST00000539148 KMOO15229 486 aa10.11□□□□□ -0.79
CLPB-210ENST00000539148 INPP4BO15327 924 aa10.11□□□□□ -0.79
CLPB-210ENST00000539148 HRO43593 1189 aa10.11□□□□□ -0.79
CLPB-210ENST00000539148 UGT1A9O60656 530 aa10.11□□□□□ -0.79
CLPB-210ENST00000539148 VPS26AO75436 327 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms