RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 DNAJB9Q9UBS3 223 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 AXIN1O15169 862 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 SLC7A4O43246 635 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 SLC4A1P02730 911 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 MTHFD2P13995 350 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 GRK3P35626 688 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 EMX1Q04741 257 aaPredicted RBP17.08■□□□□ 0.33
C2CD3-213ENST00000539061 CLCQ05315 142 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 ACOX1Q15067 660 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 LAIR2Q6ISS4 152 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 FKBP9P1Q75LS8 142 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 RBM23Q86U06 439 aaKnown RBP17.08■□□□□ 0.33
C2CD3-213ENST00000539061 SH3RF2Q8TEC5 729 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 EDEM1Q92611 657 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 ISG20Q96AZ6 181 aaKnown RBP17.08■□□□□ 0.33
C2CD3-213ENST00000539061 RBM4BQ9BQ04 359 aaKnown RBP17.08■□□□□ 0.33
C2CD3-213ENST00000539061 SGIP1Q9BQI5 828 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 RBM4Q9BWF3 364 aaKnown RBP17.08■□□□□ 0.33
C2CD3-213ENST00000539061 UGT2B28Q9BY64 529 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 BRINP2Q9C0B6 783 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 SP140LQ9H930 580 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 POLE4Q9NR33 117 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 USE1Q9NZ43 259 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 PCDHGB1Q9Y5G3 927 aa17.08■□□□□ 0.33
C2CD3-213ENST00000539061 FAM234BA2RU67 622 aa17.08■□□□□ 0.32
C2CD3-213ENST00000539061 NOBOXO60393 691 aa17.08■□□□□ 0.32
C2CD3-213ENST00000539061 CCDC159P0C7I6 412 aa17.08■□□□□ 0.32
C2CD3-213ENST00000539061 SERPINH1P50454 418 aaKnown RBP17.08■□□□□ 0.32
C2CD3-213ENST00000539061 ISL1P61371 349 aa17.08■□□□□ 0.32
C2CD3-213ENST00000539061 PPP2R2BQ00005 443 aa17.08■□□□□ 0.32
C2CD3-213ENST00000539061 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
C2CD3-213ENST00000539061 CLPPQ16740 277 aaPredicted RBP17.08■□□□□ 0.32
C2CD3-213ENST00000539061 NOL9Q5SY16 702 aaKnown RBP17.08■□□□□ 0.32
C2CD3-213ENST00000539061 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.32
C2CD3-213ENST00000539061 PAK1IP1Q9NWT1 392 aaPredicted RBP17.08■□□□□ 0.32
C2CD3-213ENST00000539061 SMIM28A0A1B0GU29 152 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 LOC100130705A0A1B0GUX0 176 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 SYCE1LA8MT33 242 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 PAPSS2O95340 614 aaPredicted RBP17.07■□□□□ 0.32
C2CD3-213ENST00000539061 AKAP5P24588 427 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 PPP5CP53041 499 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 OR4D1Q15615 310 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 ATAD3BQ5T9A4 648 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 PRR23BQ6ZRT6 265 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 AKAP14Q86UN6 197 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 LACC1Q8IV20 430 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 SVOPLQ8N434 492 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 TOP6BLQ8N6T0 577 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 ATP6V0D2Q8N8Y2 350 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 RHEBL1Q8TAI7 183 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 PABPC5Q96DU9 382 aaKnown RBP17.07■□□□□ 0.32
C2CD3-213ENST00000539061 KLRG1Q96E93 195 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 MFSD1Q9H3U5 465 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 NXF3Q9H4D5 531 aaKnown RBP17.07■□□□□ 0.32
C2CD3-213ENST00000539061 ARNT2Q9HBZ2 717 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 MOV10Q9HCE1 1003 aaKnown RBP17.07■□□□□ 0.32
C2CD3-213ENST00000539061 PDGFCQ9NRA1 345 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 ZIM2Q9NZV7 527 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 CRYL1Q9Y2S2 319 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 TIMM22Q9Y584 194 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 PMF1-BGLAPU3KQ54 211 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 MYLKQ15746 1914 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 BPTFQ12830 3046 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 SNX2O60749 519 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 CST1P01037 141 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 TCEA1P23193 301 aaKnown RBP17.07■□□□□ 0.32
C2CD3-213ENST00000539061 IST1P53990 364 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 LSM3P62310 102 aaKnown RBP17.07■□□□□ 0.32
C2CD3-213ENST00000539061 DYNC2LI1Q8TCX1 351 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 TXNDC15Q96J42 360 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 DACH2Q96NX9 599 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 TMEM209Q96SK2 561 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 SLC39A8Q9C0K1 460 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 SIK2Q9H0K1 926 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 R3HDMLQ9H3Y0 253 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 C3orf18Q9UK00 162 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 GINS2Q9Y248 185 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 NOX1Q9Y5S8 564 aa17.07■□□□□ 0.32
C2CD3-213ENST00000539061 FAM92AA1XBS5 289 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 A8MU76 341 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 GNGT2O14610 69 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 NUAK1O60285 661 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 CNTN5O94779 1100 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 SEC24AO95486 1093 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 GGT1P19440 569 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 FDXRP22570 491 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 VBP1P61758 197 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 TMEM236Q5W0B7 351 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 GPRIN1Q7Z2K8 1008 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 EFL1Q7Z2Z2 1120 aaKnown RBP17.06■□□□□ 0.32
C2CD3-213ENST00000539061 AADATQ8N5Z0 425 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 DPP10Q8N608 796 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 RHOXF1Q8NHV9 184 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 GOLGA2P5Q9HBQ8 144 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 SEMA4BQ9NPR2 832 aaPredicted RBP17.06■□□□□ 0.32
C2CD3-213ENST00000539061 COL1A2P08123 1366 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 A0A1B0GTL3 188 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 ISPDA4D126 451 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 GRXCR2A6NFK2 248 aa17.06■□□□□ 0.32
C2CD3-213ENST00000539061 MAN1A2O60476 641 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms