RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 CLPBQ9H078 707 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 ELOVL6Q9H5J4 265 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 MRM3Q9HC36 420 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 ZIM2Q9NZV7 527 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 SFMBT1Q9UHJ3 866 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 ATPIF1Q9UII2 106 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 HES2Q9Y543 173 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 CPQQ9Y646 472 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 COL2A1P02458 1487 aaPredicted RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 LOXHD1Q8IVV2 1947 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 NPEPPSL1A6NEC2 478 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 PLK4O00444 970 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 CXCR6O00574 342 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RAMP2O60895 175 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 STAU1O95793 577 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RPLP0P05388 317 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RPL10P27635 214 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 FMO3P31513 532 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 IDH2P48735 452 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 HNRNPFP52597 415 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RAB14P61106 215 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 CSNK2BP67870 215 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 SP2Q02086 613 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 QPRTQ15274 297 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 COQ5Q5HYK3 327 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 NHSL2Q5HYW2 709 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 DUS1LQ6P1R4 473 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RPS27LQ71UM5 84 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 LDB1Q86U70 411 aaPredicted RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 GATAD2AQ86YP4 633 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 TMEM209Q96SK2 561 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 MLPHQ9BV36 600 aaPredicted RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 DCSTAMPQ9H295 470 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 GPN2Q9H9Y4 310 aaPredicted RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RASSF1Q9NS23 344 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 ABCC13Q9NSE7 274 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 EPN2O95208 641 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 CHRNA1P02708 482 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 HLA-DPA1P20036 260 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RRM2P31350 389 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 VBP1P61758 197 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 ZNF181Q2M3W8 571 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 BRMS1LQ5PSV4 323 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RBM20Q5T481 1227 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 NEK5Q6P3R8 708 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 PRR23CQ6ZRP0 262 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 OR10A6Q8NH74 314 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 SH3YL1Q96HL8 342 aaPredicted RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 CNDP2Q96KP4 475 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 OR52E6Q96RD3 313 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 TFB2MQ9H5Q4 396 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 CPNE5Q9HCH3 593 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 SCUBE2Q9NQ36 999 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 NECTIN3Q9NQS3 549 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 RNF19AQ9NV58 838 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 PDP1Q9P0J1 537 aaPredicted RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 OPTCQ9UBM4 332 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 KLHL20Q9Y2M5 609 aa6.79□□□□□ -1.32
SCAPER-203ENST00000538941 TIMM13Q9Y5L4 95 aaPredicted RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 MRPL42Q9Y6G3 142 aaKnown RBP6.79□□□□□ -1.32
SCAPER-203ENST00000538941 PCP4L1A6NKN8 68 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 NDUFB5O43674 189 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 TSPAN1O60635 241 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 RPP40O75818 363 aaKnown RBP6.78□□□□□ -1.32
SCAPER-203ENST00000538941 ENO2P09104 434 aaPredicted RBP6.78□□□□□ -1.32
SCAPER-203ENST00000538941 HTR1EP28566 365 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 HTR7P34969 479 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 PLA2G16P53816 162 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 MAXP61244 160 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 EN1Q05925 392 aaPredicted RBP6.78□□□□□ -1.32
SCAPER-203ENST00000538941 CXCL9Q07325 125 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 CYP4F3Q08477 520 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 GALNT2Q10471 571 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 TWF1Q12792 350 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 PWP1Q13610 501 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 NCF4Q15080 339 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 TAB1Q15750 504 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 USP41Q3LFD5 358 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 ZNF404Q494X3 552 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 LYSMD3Q7Z3D4 306 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 AMIGO3Q86WK7 504 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 CEP97Q8IW35 865 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 BBS7Q8IWZ6 715 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 TTC29Q8NA56 475 aaPredicted RBP6.78□□□□□ -1.32
SCAPER-203ENST00000538941 COPS5Q92905 334 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 TMEM74Q96NL1 305 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 LPIN3Q9BQK8 851 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 ZFP14Q9HCL3 533 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 CCDC177Q9NQR7 707 aaPredicted RBP6.78□□□□□ -1.32
SCAPER-203ENST00000538941 TMPRSS4Q9NRS4 437 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 SACM1LQ9NTJ5 587 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 OLA1Q9NTK5 396 aaKnown RBP6.78□□□□□ -1.32
SCAPER-203ENST00000538941 KLQ9UEF7 1012 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 PTCH2Q9Y6C5 1203 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 KLRG2A4D1S0 409 aaPredicted RBP6.78□□□□□ -1.32
SCAPER-203ENST00000538941 KRT87PA6NCN2 255 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 C5orf58C9J3I9 102 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 PLOD2O00469 737 aa6.78□□□□□ -1.32
SCAPER-203ENST00000538941 ZNF195O14628 629 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms