RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 HTR1BP28222 390 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 FMO4P31512 558 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 CTSCP53634 463 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 ZC3HC1Q86WB0 502 aaKnown RBP23.21■■□□□ 1.31
TMEM260-202ENST00000538838 OR56A4Q8NGH8 313 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 HEXDCQ8WVB3 486 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 SGF29Q96ES7 293 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 RBBP8Q99708 897 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 CCDC77Q9BR77 488 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 MRPL40Q9NQ50 206 aaKnown RBP23.21■■□□□ 1.31
TMEM260-202ENST00000538838 SLC17A4Q9Y2C5 497 aa23.21■■□□□ 1.31
TMEM260-202ENST00000538838 PCYT1BQ9Y5K3 369 aaPredicted RBP23.21■■□□□ 1.31
TMEM260-202ENST00000538838 A0A1B0GTW7 788 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 OR2AG2A6NM03 316 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 INHBAP08476 426 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 GNSP15586 552 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 KELP23276 732 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 MSH2P43246 934 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 CSE1LP55060 971 aaKnown RBP23.2■■□□□ 1.3
TMEM260-202ENST00000538838 GTF2H3Q13889 308 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 CASP8Q14790 479 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 CTSL3PQ5NE16 218 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 PEAR1Q5VY43 1037 aaPredicted RBP23.2■■□□□ 1.3
TMEM260-202ENST00000538838 ZNF549Q6P9A3 640 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 ENPP7Q6UWV6 458 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 SYT12Q8IV01 421 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 EPS8L3Q8TE67 593 aaKnown RBP23.2■■□□□ 1.3
TMEM260-202ENST00000538838 DCAKDQ8WVC6 231 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 PDXPQ96GD0 296 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 BIRC8Q96P09 236 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 NDNQ99608 321 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 DHRS4Q9BTZ2 278 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 SUSD2Q9UGT4 822 aa23.2■■□□□ 1.3
TMEM260-202ENST00000538838 PNMA8BQ9ULN7 279 aaPredicted RBP23.2■■□□□ 1.3
TMEM260-202ENST00000538838 PI4KAP42356 2102 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 SMIM23A6NLE4 172 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 TLR4O00206 839 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 SGTAO43765 313 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 RPS3P23396 243 aaKnown RBP eCLIP23.19■■□□□ 1.3
TMEM260-202ENST00000538838 IFFO1Q0D2I5 559 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 OVGP1Q12889 678 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 RBM20Q5T481 1227 aaKnown RBP23.19■■□□□ 1.3
TMEM260-202ENST00000538838 CRTC3Q6UUV7 619 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 OR1E3Q8WZA6 343 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 VPS39Q96JC1 886 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 ZIM3Q96PE6 472 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 RHOJQ9H4E5 214 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 MOSPD1Q9UJG1 213 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 SMG5Q9UPR3 1016 aaKnown RBP23.19■■□□□ 1.3
TMEM260-202ENST00000538838 NFS1Q9Y697 457 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 IKBKGQ9Y6K9 419 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 DMDP11532 3685 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 SPTY2D1-AS1A0A0U1RR47 76 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 PRSS38A1L453 326 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 VILLO15195 856 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 NUAK1O60285 661 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 DNAJC6O75061 913 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 FUCA1P04066 466 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 SLCO1A2P46721 670 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 ADARP55265 1226 aaKnown RBP23.19■■□□□ 1.3
TMEM260-202ENST00000538838 PTK2BQ14289 1009 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 FZD2Q14332 565 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 GRTP1Q5TC63 336 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 SPATS2Q86XZ4 545 aaKnown RBP23.19■■□□□ 1.3
TMEM260-202ENST00000538838 TRAPPC5Q8IUR0 188 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 IQCKQ8N0W5 287 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 BEND7Q8N7W2 519 aaPredicted RBP23.19■■□□□ 1.3
TMEM260-202ENST00000538838 ACVR1CQ8NER5 493 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 ANKRD7Q92527 254 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 ZBTB9Q96C00 473 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 CTNNAL1Q9UBT7 734 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 KLQ9UEF7 1012 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 FETUBQ9UGM5 382 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 GNPTGQ9UJJ9 305 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 RAB23Q9ULC3 237 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 PRKAB1Q9Y478 270 aa23.19■■□□□ 1.3
TMEM260-202ENST00000538838 ADAMTS9Q9P2N4 1935 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 MYO15AQ9UKN7 3530 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 A0A1B0GVT2 93 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 PRR5-ARHGAP8B1AHC4 643 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 SCAMP1O15126 338 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 ESR1P03372 595 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 IVLP07476 585 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 LIMK2P53671 638 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 NXPH1P58417 271 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 BMPR2Q13873 1038 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 TEAD4Q15561 434 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 PTRHD1Q6GMV3 140 aaKnown RBP23.18■■□□□ 1.3
TMEM260-202ENST00000538838 TMEM220Q6QAJ8 160 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 DCP2Q8IU60 420 aaKnown RBP23.18■■□□□ 1.3
TMEM260-202ENST00000538838 GPATCH11Q8N954 259 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 LKAAEAR1Q8TD35 194 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 TSACCQ96A04 125 aaPredicted RBP23.18■■□□□ 1.3
TMEM260-202ENST00000538838 CAAP1Q9H8G2 361 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 CYP4F12Q9HCS2 524 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 SUFUQ9UMX1 484 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 PCDHB1Q9Y5F3 818 aa23.18■■□□□ 1.3
TMEM260-202ENST00000538838 IQCF5A8MTL0 148 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 CHUKO15111 745 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 NIPSNAP2O75323 286 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms