RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 FAM151BQ6UXP7 276 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 MARK2Q7KZI7 788 aaKnown RBP13.52□□□□□ -0.25
CD9-208ENST00000538834 CHST15Q7LFX5 561 aaPredicted RBP13.52□□□□□ -0.25
CD9-208ENST00000538834 SNX20Q7Z614 316 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 SPRED1Q7Z699 444 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 LRRTM4Q86VH4 590 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 RASGEF1AQ8N9B8 481 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 OR13J1Q8NGT2 312 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 SLCO2A1Q92959 643 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 CCDC74AQ96AQ1 378 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 LRRC45Q96CN5 670 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 GRAMD1AQ96CP6 724 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 DNAJC1Q96KC8 554 aaKnown RBP13.52□□□□□ -0.25
CD9-208ENST00000538834 LINC00615Q96LM1 132 aaPredicted RBP13.52□□□□□ -0.25
CD9-208ENST00000538834 DPEP2Q9H4A9 486 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 RAB6BQ9NRW1 208 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 SIRPGQ9P1W8 387 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 ZNHIT2Q9UHR6 403 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 PRKAB1Q9Y478 270 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 AHCTF1Q8WYP5 2266 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 LAMA5O15230 3695 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 PKD1L2Q7Z442 2459 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 PCM1Q15154 2024 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 TRABD2BA6NFA1 517 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 PGRMC1O00264 195 aaKnown RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 TAF4O00268 1085 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 ZNF185O15231 689 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 F3P13726 295 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 JUPP14923 745 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 BRAFP15056 766 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 TCP1P17987 556 aaKnown RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 MSNP26038 577 aaKnown RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 ARSDP51689 593 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 MAZP56270 477 aaKnown RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 ZFP36L1Q07352 338 aaKnown RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 CLPPQ16740 277 aaPredicted RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 ISXQ2M1V0 245 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 AGAP9Q5VTM2 703 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 ARMC3Q5W041 872 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 MICALCLQ6ZW33 695 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 CREG2Q8IUH2 290 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 NXPE1Q8N323 547 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 CCDC89Q8N998 374 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 MAPK15Q8TD08 544 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 CCDC97Q96F63 343 aaPredicted RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 PRR11Q96HE9 360 aaPredicted RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 ZNF778Q96MU6 729 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
CD9-208ENST00000538834 SMARCAL1Q9NZC9 954 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 LRIT1Q9P2V4 623 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 ENTPD2Q9Y5L3 495 aa13.51□□□□□ -0.25
CD9-208ENST00000538834 CFAP47Q6ZTR5 3102 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 TCRBV7S3A2A0A539 114 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 OR5K4A6NMS3 321 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 B4DGG1 531 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 PHF2O75151 1096 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 DXOO77932 396 aaKnown RBP13.5□□□□□ -0.25
CD9-208ENST00000538834 APRTP07741 180 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 ACP5P13686 325 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 XRCC1P18887 633 aaPredicted RBP13.5□□□□□ -0.25
CD9-208ENST00000538834 ADRA1DP25100 572 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 FOXN2P32314 431 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 ACTN2P35609 894 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 FNTAP49354 379 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 CDKN1CP49918 316 aaPredicted RBP13.5□□□□□ -0.25
CD9-208ENST00000538834 UBE2IP63279 158 aaKnown RBP13.5□□□□□ -0.25
CD9-208ENST00000538834 CCL7P80098 99 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 CFHR1Q03591 330 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 POU6F1Q14863 301 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 BCL7AQ4VC05 210 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 CCDC157Q569K6 752 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 TMPRSS9Q7Z410 1059 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 PIANPQ8IYJ0 282 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 TAB3Q8N5C8 712 aaPredicted RBP13.5□□□□□ -0.25
CD9-208ENST00000538834 SLC37A2Q8TED4 501 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 MAGOHBQ96A72 148 aaKnown RBP13.5□□□□□ -0.25
CD9-208ENST00000538834 AP1M1Q9BXS5 423 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 LRRN3Q9H3W5 708 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 ASB8Q9H765 288 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 TREX1Q9NSU2 369 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 PIH1D1Q9NWS0 290 aaKnown RBP13.5□□□□□ -0.25
CD9-208ENST00000538834 SCHIP1Q9P0W5 487 aaPredicted RBP13.5□□□□□ -0.25
CD9-208ENST00000538834 PDP2Q9P2J9 529 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 PCYOX1Q9UHG3 505 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 KCNK6Q9Y257 313 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
CD9-208ENST00000538834 PTPRQQ9UMZ3 2332 aa13.5□□□□□ -0.25
CD9-208ENST00000538834 KIR2DS5A0A0G2JLQ3 304 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 A0A0G2JNG1 304 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 HEATR9A2RTY3 570 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 KLHL33A6NCF5 533 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 D6RAR5 112 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 KIR2DS3K7RE56 304 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 CCL22O00626 93 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 IVDP26440 423 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 CD1CP29017 333 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 CCKBRP32239 447 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 MAGEA3P43357 314 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 KIR2DS5Q14953 304 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms