RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SUPT3HO75486 399 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 UPP2O95045 317 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 ESR1P03372 595 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 UBTFL6P0CB48 400 aaPredicted RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 HDCP19113 662 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 RPS3P23396 243 aaKnown RBP eCLIP9.16□□□□□ -0.941e-11■■■■□ 22.3
DDB1-211ENST00000538280 IRS1P35568 1242 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 PTGER3P43115 390 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 ZFP36L2P47974 494 aaKnown RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 CDKN1CP49918 316 aaPredicted RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 HK3P52790 923 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 RHDQ02161 417 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 FOXM1Q08050 763 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 PLD1Q13393 1074 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 COL19A1Q14993 1142 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 TSNQ15631 228 aaKnown RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 PTPRNQ16849 979 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 PFKFB4Q16877 469 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 SPATS1Q496A3 300 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 AARS2Q5JTZ9 985 aaKnown RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 SAMD4BQ5PRF9 694 aaKnown RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 RARS2Q5T160 578 aaKnown RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 FOXB2Q5VYV0 432 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 PRMT9Q6P2P2 845 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 EP400NLQ6ZTU2 488 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 SPATA19Q7Z5L4 167 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 SYVN1Q86TM6 617 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 RETREG3Q86VR2 466 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 STK40Q8N2I9 435 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 RYBPQ8N488 228 aaPredicted RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 MINDY1Q8N5J2 469 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 DCAF4L2Q8NA75 395 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 PCYOX1LQ8NBM8 494 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 HJURPQ8NCD3 748 aaPredicted RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 ICA1LQ8NDH6 482 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 OR9I1Q8NGQ6 314 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 TRPC4APQ8TEL6 797 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 EXT2Q93063 718 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.16□□□□□ -0.94
DDB1-211ENST00000538280 ZUFSPQ96AP4 578 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 ZNF689Q96CS4 500 aaPredicted RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 LRGUKQ96M69 825 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 HOPXQ9BPY8 73 aaPredicted RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 SLC2A11Q9BYW1 496 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 NACA2Q9H009 215 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 CCDC68Q9H2F9 335 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 RC3H2Q9HBD1 1191 aaKnown RBP9.16□□□□□ -0.94
DDB1-211ENST00000538280 IL21Q9HBE4 155 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 SPAG4Q9NPE6 437 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 AIG1Q9NVV5 245 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 NUDT4Q9NZJ9 180 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 MAP10Q9P2G4 905 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 GALPQ9UBC7 116 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 RNF112Q9ULX5 631 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 MAFFQ9ULX9 164 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 NDUFAF1Q9Y375 327 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 ZNF711Q9Y462 761 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 PCDHB1Q9Y5F3 818 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 PCDHGC4Q9Y5F7 938 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 GPR45Q9Y5Y3 372 aa9.16□□□□□ -0.94
DDB1-211ENST00000538280 DENND4CQ5VZ89 1909 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 TRBV5-4A0A0C4DH59 114 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 A0A0J9YYE9 177 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 A0A1B0GTL3 188 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 CXorf51AA0A1B0GTR3 108 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 CAPN8A6NHC0 703 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 C19orf67A6NJJ6 358 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 CBX4O00257 560 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 STX7O15400 261 aaKnown RBP9.15□□□□□ -0.94
DDB1-211ENST00000538280 TSPAN3O60637 253 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 DNAJA2O60884 412 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 TBL1XO60907 577 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 NIPSNAP2O75323 286 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 RNASEH2AO75792 299 aaKnown RBP9.15□□□□□ -0.94
DDB1-211ENST00000538280 ESRRBO95718 433 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 MLYCDO95822 493 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 C1RP00736 705 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 UROSP10746 265 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 IRF1P10914 325 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 HSD17B1P14061 328 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 GFAPP14136 432 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 CAPN3P20807 821 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 MZF1P28698 734 aaPredicted RBP9.15□□□□□ -0.94
DDB1-211ENST00000538280 SLC7A1P30825 629 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 HSPA13P48723 471 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 CSNK1DP48730 415 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 ALDH7A1P49419 539 aaKnown RBP9.15□□□□□ -0.94
DDB1-211ENST00000538280 CLCN7P51798 805 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 AP1S1P61966 158 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 FOLH1Q04609 750 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 CACNG1Q06432 222 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 GPM6BQ13491 265 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 GRB7Q14451 532 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 VEPH1Q14D04 833 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 PDK3Q15120 406 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 GRAMD1BQ3KR37 738 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 MMEL1Q495T6 779 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 PDCD4Q53EL6 469 aaKnown RBP9.15□□□□□ -0.94
DDB1-211ENST00000538280 RNF220Q5VTB9 566 aa9.15□□□□□ -0.94
DDB1-211ENST00000538280 RNF165Q6ZSG1 346 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms