RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 IGFL2Q6UWQ7 119 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 NDUFAF2Q8N183 169 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 EXD1Q8NHP7 514 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 FNIP1Q8TF40 1166 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 CA5BP1Q8WTZ4 195 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 RSC1A1Q92681 617 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 NT5C3BQ969T7 300 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 AP2M1Q96CW1 435 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 CXorf40BQ96DE9 158 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 PAGE5Q96GU1 130 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 CINPQ9BW66 212 aaPredicted RBP8.99□□□□□ -0.97
USP28-205ENST00000537706 STMN3Q9NZ72 180 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 MAPK8IP1Q9UQF2 711 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 BTRCQ9Y297 605 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 CSAG2Q9Y5P2 127 aa8.99□□□□□ -0.97
USP28-205ENST00000537706 IGHV5-51A0A0C4DH38 117 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 MTA2O94776 668 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 MLYCDO95822 493 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 CPP00450 1065 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 ERBB2P04626 1255 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 TFE3P19532 575 aaPredicted RBP8.98□□□□□ -0.97
USP28-205ENST00000537706 SCNN1AP37088 669 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 FMO5P49326 533 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 CLCNKAP51800 687 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 YBX1P67809 324 aaKnown RBP8.98□□□□□ -0.97
USP28-205ENST00000537706 PPP2R2BQ00005 443 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 DNTTIP2Q5QJE6 756 aaKnown RBP8.98□□□□□ -0.97
USP28-205ENST00000537706 FAM69BQ5VUD6 431 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 ZNF324BQ6AW86 544 aaPredicted RBP8.98□□□□□ -0.97
USP28-205ENST00000537706 ARMC6Q6NXE6 501 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 Q6ZVL8 140 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 HSD11B1LQ7Z5J1 315 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 PHLDB2Q86SQ0 1253 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 TRIM74Q86UV6 250 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 D2HGDHQ8N465 521 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 TTC30BQ8N4P2 665 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 ALPK1Q96QP1 1244 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 TREX2Q9BQ50 279 aaPredicted RBP8.98□□□□□ -0.97
USP28-205ENST00000537706 ACTR5Q9H9F9 607 aaPredicted RBP8.98□□□□□ -0.97
USP28-205ENST00000537706 SYTL2Q9HCH5 934 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 SOHLH2Q9NX45 425 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 NDOR1Q9UHB4 597 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 CNTN6Q9UQ52 1028 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 PTRH2Q9Y3E5 179 aaKnown RBP8.98□□□□□ -0.97
USP28-205ENST00000537706 PRKAB1Q9Y478 270 aa8.98□□□□□ -0.97
USP28-205ENST00000537706 TLCD2A6NGC4 264 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 PDZK1P1A8MUH7 402 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 PMM2O15305 246 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 P4HA2O15460 535 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 RENBPP51606 427 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 DGKQP52824 942 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 AP1S1P61966 158 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 GPR19Q15760 415 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 FAM102AQ5T9C2 384 aaPredicted RBP8.97□□□□□ -0.97
USP28-205ENST00000537706 MANEALQ5VSG8 457 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 PRAMEF13Q5VWM6 474 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 PLEKHA7Q6IQ23 1121 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 LCN10Q6JVE6 187 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 SPOCD1Q6ZMY3 1216 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 CAMKMTQ7Z624 323 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 NLRP8Q86W28 1048 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 ACBD4Q8NC06 268 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 ZNF501Q96CX3 271 aaPredicted RBP8.97□□□□□ -0.97
USP28-205ENST00000537706 ARSGQ96EG1 525 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 FAM81BQ96LP2 452 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 TRIM56Q9BRZ2 755 aaKnown RBP8.97□□□□□ -0.97
USP28-205ENST00000537706 NDC1Q9BTX1 674 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 COQ3Q9NZJ6 369 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 ABI3Q9P2A4 366 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 TRAV17A0A0B4J275 112 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 DYTNA2CJ06 578 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 SLC9B1P1A6NJY1 282 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 SLC19A2O60779 497 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 PALMO75781 387 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 ZBTB11O95625 1053 aaPredicted RBP8.97□□□□□ -0.97
USP28-205ENST00000537706 RORAP35398 523 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 ARG2P78540 354 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 MLIPQ5VWP3 458 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 ATL3Q6DD88 541 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 USP45Q70EL2 814 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 ENOSF1Q7L5Y1 443 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 PASD1Q8IV76 773 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 AOPEPQ8N6M6 819 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 RTL3Q8N8U3 475 aaKnown RBP8.97□□□□□ -0.97
USP28-205ENST00000537706 MSANTD4Q8NCY6 345 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 ANP32BQ92688 251 aaKnown RBP8.97□□□□□ -0.97
USP28-205ENST00000537706 LMF1Q96S06 567 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 TSPY26PQ9H489 355 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 CATSPERBQ9H7T0 1116 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 PCMTD2Q9NV79 361 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 KCNN3Q9UGI6 736 aa8.97□□□□□ -0.97
USP28-205ENST00000537706 RNF212BA8MTL3 300 aa8.96□□□□□ -0.97
USP28-205ENST00000537706 AGPSO00116 658 aa8.96□□□□□ -0.97
USP28-205ENST00000537706 DNAJC6O75061 913 aa8.96□□□□□ -0.97
USP28-205ENST00000537706 LRIG2O94898 1065 aa8.96□□□□□ -0.97
USP28-205ENST00000537706 YEATS4O95619 227 aa8.96□□□□□ -0.97
USP28-205ENST00000537706 CAPN1P07384 714 aa8.96□□□□□ -0.97
USP28-205ENST00000537706 KRT9P35527 623 aa8.96□□□□□ -0.97
USP28-205ENST00000537706 USP8P40818 1118 aa8.96□□□□□ -0.97
USP28-205ENST00000537706 SLC19A1P41440 591 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms