RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 E2F5Q15329 346 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 KLHDC7AQ5VTJ3 777 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 ASB18Q6ZVZ8 466 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 ANO5Q75V66 913 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 ZNF551Q7Z340 670 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-203ENST00000536742 DSG4Q86SJ6 1040 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 LDLRAD3Q86YD5 345 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 TGIF2LYQ8IUE0 185 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 CCDC13Q8IYE1 715 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 TXLNBQ8N3L3 684 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 SRBD1Q8N5C6 995 aaKnown RBP6.62□□□□□ -1.35
CCDC60-203ENST00000536742 CHDHQ8NE62 594 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-203ENST00000536742 DNAJB14Q8TBM8 379 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 LRRC15Q8TF66 581 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 FRAT1Q92837 279 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-203ENST00000536742 PDLIM2Q96JY6 352 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 SLITRK1Q96PX8 696 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 SLC22A12Q96S37 553 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 RIT2Q99578 217 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 LZTS2Q9BRK4 669 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 NECTIN3Q9NQS3 549 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 HELLSQ9NRZ9 838 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 GCNT4Q9P109 453 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 TBC1D14Q9P2M4 693 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 LRCH1Q9Y2L9 728 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 KIF26BQ2KJY2 2108 aa6.62□□□□□ -1.35
CCDC60-203ENST00000536742 ACANP16112 2415 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 PKD1L1Q8TDX9 2849 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 M0QZQ0 153 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 TLR4O00206 839 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 HOXC11O43248 304 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 CHMP2AO43633 222 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 MAGEC1O60732 1142 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 DKC1O60832 514 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 TJP3O95049 919 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 CHRM2P08172 466 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 CD19P15391 556 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 KRT4P19013 534 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 FOXI1Q12951 378 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 KRT72Q14CN4 511 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 ZRSR2Q15696 482 aaKnown RBP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 SMN1Q16637 294 aaKnown RBP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 ZC2HC1CQ53FD0 456 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 ARL6IP4Q66PJ3 421 aaKnown RBP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 MRNIPQ6NTE8 343 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 ANKRD16Q6P6B7 361 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 RAB11FIP2Q7L804 512 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 RP9Q8TA86 221 aaKnown RBP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 SPPL2BQ8TCT7 592 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 RFKQ969G6 155 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 ZNF566Q969W8 418 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 ARRDC3Q96B67 414 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 OTUB2Q96DC9 234 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 TMEM41AQ96HV5 264 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 CEP170P1Q96L14 293 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 PLCB1Q9NQ66 1216 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 TBC1D23Q9NUY8 699 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 PRMT7Q9NVM4 692 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 NCKIPSDQ9NZQ3 722 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 DNAJB11Q9UBS4 358 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 MAGED2Q9UNF1 606 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-203ENST00000536742 USP22Q9UPT9 525 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 TNNQ9UQP3 1299 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 GDAQ9Y2T3 454 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 STON1Q9Y6Q2 735 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 MYOFQ9NZM1 2061 aa6.61□□□□□ -1.35
CCDC60-203ENST00000536742 COL27A1Q8IZC6 1860 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-203ENST00000536742 A0A1W2PR77 199 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 WASH3PC4AMC7 463 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 PSMD9O00233 223 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 ADAMTS3O15072 1205 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 HARSP12081 509 aaKnown RBP6.6□□□□□ -1.35
CCDC60-203ENST00000536742 COX6B1P14854 86 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 KLK2P20151 261 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 UQCRC1P31930 480 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 HSPA7P48741 367 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 PSMC5P62195 406 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 MPEG1Q2M385 716 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 DEPDC1Q5TB30 811 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 PLA2G4FQ68DD2 849 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 MIER3Q7Z3K6 550 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 BIVMQ86UB2 503 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 ZFAND4Q86XD8 727 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 SLC25A45Q8N413 288 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 NDRG1Q92597 394 aaKnown RBP6.6□□□□□ -1.35
CCDC60-203ENST00000536742 APOLD1Q96LR9 279 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 STK33Q9BYT3 514 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 STRADBQ9C0K7 418 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 GLT8D2Q9H1C3 349 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 CHMP4BQ9H444 224 aaKnown RBP6.6□□□□□ -1.35
CCDC60-203ENST00000536742 TTC12Q9H892 705 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-203ENST00000536742 SGK2Q9HBY8 427 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 CHST11Q9NPF2 352 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 RIC8AQ9NPQ8 531 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 SERTAD4Q9NUC0 356 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 FOXJ2Q9P0K8 574 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 SNX14Q9Y5W7 946 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 PRRC2CQ9Y520 2896 aaKnown RBP6.6□□□□□ -1.35
CCDC60-203ENST00000536742 TRIP11Q15643 1979 aa6.6□□□□□ -1.35
CCDC60-203ENST00000536742 PLXNA2O75051 1894 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms