RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 QKIQ96PU8 341 aaKnown RBP eCLIP12.99□□□□□ -0.33
MRPS35-202ENST00000536569 EFHD1Q9BUP0 239 aa12.99□□□□□ -0.33
MRPS35-202ENST00000536569 ZCCHC2Q9C0B9 1178 aaKnown RBP12.99□□□□□ -0.33
MRPS35-202ENST00000536569 TRIT1Q9H3H1 467 aaKnown RBP12.99□□□□□ -0.33
MRPS35-202ENST00000536569 OSGEPL1Q9H4B0 414 aa12.99□□□□□ -0.33
MRPS35-202ENST00000536569 PRDM8Q9NQV8 689 aa12.99□□□□□ -0.33
MRPS35-202ENST00000536569 POT1Q9NUX5 634 aa12.99□□□□□ -0.33
MRPS35-202ENST00000536569 KLHL8Q9P2G9 620 aaPredicted RBP12.99□□□□□ -0.33
MRPS35-202ENST00000536569 SAE1Q9UBE0 346 aaPredicted RBP12.99□□□□□ -0.33
MRPS35-202ENST00000536569 SPO11Q9Y5K1 396 aa12.99□□□□□ -0.33
MRPS35-202ENST00000536569 B3GALT1Q9Y5Z6 326 aa12.99□□□□□ -0.33
MRPS35-202ENST00000536569 DNMT3AQ9Y6K1 912 aaPredicted RBP12.99□□□□□ -0.33
MRPS35-202ENST00000536569 HELZ2Q9BYK8 2649 aaKnown RBP12.98□□□□□ -0.33
MRPS35-202ENST00000536569 APOC4-APOC2K7ER74 178 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 AGRPO00253 132 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 VIPP01282 170 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 APOC2P02655 101 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 C9P02748 559 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 IDSP22304 550 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 MPSTP25325 297 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 MAP4P27816 1152 aaKnown RBP12.98□□□□□ -0.33
MRPS35-202ENST00000536569 UGT1A3P35503 534 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 SPAM1P38567 509 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 TMEM115Q12893 351 aaPredicted RBP12.98□□□□□ -0.33
MRPS35-202ENST00000536569 ITGA9Q13797 1035 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 GTF2H3Q13889 308 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 SLC1A5Q15758 541 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 ATP13A5Q4VNC0 1218 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 SIRPB2Q5JXA9 342 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 LDLRAP1Q5SW96 308 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 VASH2Q86V25 355 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 ZC3H18Q86VM9 953 aaKnown RBP12.98□□□□□ -0.33
MRPS35-202ENST00000536569 ZNF761Q86XN6 746 aaPredicted RBP12.98□□□□□ -0.33
MRPS35-202ENST00000536569 CCDC50Q8IVM0 306 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 ZNF547Q8IVP9 402 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 TRIM48Q8IWZ4 208 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 ZNF567Q8N184 647 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 TTC30BQ8N4P2 665 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 IL22RA1Q8N6P7 574 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 MRGPRX2Q96LB1 330 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 TTC25Q96NG3 672 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 PANX2Q96RD6 677 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 C19orf43Q9BQ61 176 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 ARHGAP9Q9BRR9 750 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 SPRY4Q9C004 299 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 SEMA4CQ9C0C4 833 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 IL26Q9NPH9 171 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 OCIAD1Q9NX40 245 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 UBP1Q9NZI7 540 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 IL17CQ9P0M4 197 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 SLC23A2Q9UGH3 650 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 PILRAQ9UKJ1 303 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 PKP3Q9Y446 797 aa12.98□□□□□ -0.33
MRPS35-202ENST00000536569 KLHL33A6NCF5 533 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 BTNL10A8MVZ5 291 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 AURKAO14965 403 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 ANXA9O76027 345 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 IPO7O95373 1038 aaKnown RBP12.97□□□□□ -0.33
MRPS35-202ENST00000536569 SLC4A1P02730 911 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 PTPN7P35236 360 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 SLC19A1P41440 591 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 ADCY2Q08462 1091 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 DMPKQ09013 629 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 SRSF6Q13247 344 aaKnown RBP12.97□□□□□ -0.33
MRPS35-202ENST00000536569 MAP7Q14244 749 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 ZNF648Q5T619 568 aaPredicted RBP12.97□□□□□ -0.33
MRPS35-202ENST00000536569 ITPRIPL1Q6GPH6 555 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 CRTC3Q6UUV7 619 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 B4GALNT4Q76KP1 1039 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 GLT6D1Q7Z4J2 308 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 C11orf96Q7Z7L8 435 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 DAAM2Q86T65 1068 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 TMTC1Q8IUR5 882 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 CACNA2D3Q8IZS8 1091 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 RTP4Q96DX8 246 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 ZNF514Q96K75 400 aaPredicted RBP12.97□□□□□ -0.33
MRPS35-202ENST00000536569 PPP1R2P1Q96PQ5 205 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 FSD1LQ9BXM9 530 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 RAB33BQ9H082 229 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 ARFGAP3Q9NP61 516 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 SMOXQ9NWM0 555 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 EPHA6Q9UF33 1036 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 TMPRSS11EQ9UL52 423 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 TMEM184BQ9Y519 407 aaPredicted RBP12.97□□□□□ -0.33
MRPS35-202ENST00000536569 PCDHA3Q9Y5H8 950 aa12.97□□□□□ -0.33
MRPS35-202ENST00000536569 ZNF462Q96JM2 2506 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 SDK2Q58EX2 2172 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 CCDC66A2RUB6 948 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 PDZK1P1A8MUH7 402 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 J3QKU1 62 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 RAD1O60671 282 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 UBXN7O94888 489 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 AMD1P17707 334 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 FECHP22830 423 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 CTNNA1P35221 906 aaKnown RBP12.96□□□□□ -0.33
MRPS35-202ENST00000536569 CETN2P41208 172 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 HALP42357 657 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 GEMP55040 296 aa12.96□□□□□ -0.33
MRPS35-202ENST00000536569 ABHD18Q0P651 414 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms