RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CARD9Q9H257 536 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 ARNT2Q9HBZ2 717 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 TRIM39Q9HCM9 518 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 KLHL8Q9P2G9 620 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-207ENST00000536483 TRIM10Q9UDY6 481 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 SPO11Q9Y5K1 396 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 MACROD2A1Z1Q3 448 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 GOLGA6BA6NDN3 693 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 PRR19A6NJB7 356 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.3□□□□□ -0.44
PRKDC-207ENST00000536483 STMND1H3BQB6 276 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 H7C0C1 242 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 CHUKO15111 745 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 SUV39H1O43463 412 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 NUAK1O60285 661 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 ANXA9O76027 345 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
PRKDC-207ENST00000536483 BPIP17213 487 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 GPR3P46089 330 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 ATP5OP48047 213 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 ARSDP51689 593 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 EIF3EP60228 445 aaKnown RBP12.3□□□□□ -0.44
PRKDC-207ENST00000536483 MSLNQ13421 630 aaPredicted RBP12.3□□□□□ -0.44
PRKDC-207ENST00000536483 BIRC2Q13490 618 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 CLCA4Q14CN2 919 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 PCSK7Q16549 785 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 SIRPB2Q5JXA9 342 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 ANKRD20A2Q5SQ80 823 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 ANKRD20A1Q5TYW2 823 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 ANKRD20A3Q5VUR7 823 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 NKAIN2Q5VXU1 208 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 NAGSQ8N159 534 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 SLC35B2Q8TB61 432 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 OR2M4Q96R27 311 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 TAAR9Q96RI9 348 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 GPR63Q9BZJ6 419 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 B3GNT4Q9C0J1 378 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 UBP1Q9NZI7 540 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 IL17CQ9P0M4 197 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 SHOC2Q9UQ13 582 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 TMEM98Q9Y2Y6 226 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 AAR2Q9Y312 384 aaKnown RBP12.3□□□□□ -0.44
PRKDC-207ENST00000536483 PLEKHM1Q9Y4G2 1056 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 OAS3Q9Y6K5 1087 aaKnown RBP12.3□□□□□ -0.44
PRKDC-207ENST00000536483 CAPN6Q9Y6Q1 641 aa12.3□□□□□ -0.44
PRKDC-207ENST00000536483 A6NCN8 305 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 HGSO14964 777 aaPredicted RBP12.29□□□□□ -0.44
PRKDC-207ENST00000536483 AURKAO14965 403 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 PPM1DO15297 605 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 ZW10O43264 779 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 KRT86O43790 486 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 PIRTP0C851 137 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 MPSTP25325 297 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 FASLGP48023 281 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 LIMK2P53671 638 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 GEMP55040 296 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 CCDC181Q5TID7 509 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 AADACL2Q6P093 401 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 DOK6Q6PKX4 331 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 KDELC2Q7Z4H8 507 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 LRRC8AQ8IWT6 810 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 NKD1Q969G9 470 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 GLYATL1Q969I3 302 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 RTP4Q96DX8 246 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 SPATA13Q96N96 652 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 SLC12A9Q9BXP2 914 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 FRMD8P1Q9BZ68 369 aaPredicted RBP12.29□□□□□ -0.44
PRKDC-207ENST00000536483 IL26Q9NPH9 171 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 GEMIN8Q9NWZ8 242 aaKnown RBP12.29□□□□□ -0.44
PRKDC-207ENST00000536483 RSPH14Q9UHP6 348 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 SDK2Q58EX2 2172 aa12.29□□□□□ -0.44
PRKDC-207ENST00000536483 GOLGA6L9A6NEM1 432 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 VEGFDO43915 354 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 STK10O94804 968 aaKnown RBP12.28□□□□□ -0.44
PRKDC-207ENST00000536483 FTCDO95954 541 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
PRKDC-207ENST00000536483 ACTR1BP42025 376 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 ACTR1AP61163 376 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 TRA2AQ13595 282 aaKnown RBP eCLIP12.28□□□□□ -0.44
PRKDC-207ENST00000536483 ZNF569Q5MCW4 686 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 KCTD11Q693B1 232 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 DARS2Q6PI48 645 aaKnown RBP12.28□□□□□ -0.44
PRKDC-207ENST00000536483 TRIM74Q86UV6 250 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 SFRP1Q8N474 314 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 IL22RA1Q8N6P7 574 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 AGBL5Q8NDL9 886 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 OR4D9Q8NGE8 314 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 ART4Q93070 314 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 SPATA16Q9BXB7 569 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 SLC25A18Q9H1K4 315 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 TMEM9Q9P0T7 183 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 ATXN10Q9UBB4 475 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 FEZ2Q9UHY8 353 aaPredicted RBP12.28□□□□□ -0.44
PRKDC-207ENST00000536483 TMPRSS11EQ9UL52 423 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 PCDHGA3Q9Y5H0 932 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms