RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RUNDC3BQ96NL0 473 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 TIMM29Q9BSF4 260 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 SCNM1Q9BWG6 230 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 IL22Q9GZX6 179 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 BFARQ9NZS9 450 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 TBC1D29Q9UFV1 150 aa22.41■■□□□ 1.18
SFSWAP-204ENST00000535399 OR51F1A6NGY5 319 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 PRR19A6NJB7 356 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 CCDC188H7C350 402 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 ZNF7P17097 686 aaPredicted RBP22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 MSH3P20585 1137 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 AKT1P31749 480 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 MAZP56270 477 aaKnown RBP22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 CLDN6P56747 220 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 SARNPP82979 210 aaKnown RBP22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 INSM1Q01101 510 aaPredicted RBP22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 CACNG1Q06432 222 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 PLA2G4EQ3MJ16 856 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 ZRANB3Q5FWF4 1079 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 TRAPPC5Q8IUR0 188 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 NAGSQ8N159 534 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 NAT8LQ8N9F0 302 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 PATE1Q8WXA2 126 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 HDAC10Q969S8 669 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 C16orf45Q96MC5 204 aaPredicted RBP22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 CHRAC1Q9NRG0 131 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 SYBUQ9NX95 663 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 RABGEF1Q9UJ41 708 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 KLK13Q9UKR3 277 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 ANGPTL2Q9UKU9 493 aa22.4■■□□□ 1.18
SFSWAP-204ENST00000535399 MYLKQ15746 1914 aa22.39■■□□□ 1.18
SFSWAP-204ENST00000535399 ZNF106Q9H2Y7 1883 aaKnown RBP22.39■■□□□ 1.18
SFSWAP-204ENST00000535399 IGLV3-16A0A075B6K0 115 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 FAM221BA6H8Z2 402 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 A6NCN8 305 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 SGTAO43765 313 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 OPA1O60313 960 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 AVILO75366 819 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 ACRV1P26436 265 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 FOXN2P32314 431 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 RNASEH2BQ5TBB1 312 aaKnown RBP22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 TMEM220Q6QAJ8 160 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 SYDE1Q6ZW31 735 aaPredicted RBP22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 SERPINA9Q86WD7 417 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 OR6C4Q8NGE1 309 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 CCDC74AQ96AQ1 378 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 COPS8Q99627 209 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 KIFC1Q9BW19 673 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 KLC4Q9NSK0 619 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 ZDHHC3Q9NYG2 299 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 ASIC3Q9UHC3 531 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 RNF215Q9Y6U7 377 aa22.39■■□□□ 1.17
SFSWAP-204ENST00000535399 BPTFQ12830 3046 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 GOT2P00505 430 aaKnown RBP22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 MLNP12872 115 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 GLB1P16278 677 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 IVDP26440 423 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 DR1Q01658 176 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 INSCQ1MX18 579 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 AFTPHQ6ULP2 937 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 DET1Q7L5Y6 550 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 TAS2R42Q7RTR8 314 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 TMPRSS12Q86WS5 348 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 JAMLQ86YT9 394 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 PPIL6Q8IXY8 311 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 GALNT15Q8N3T1 639 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 ARL14Q8N4G2 192 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 MAPK15Q8TD08 544 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 NAT14Q8WUY8 206 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 HEXDCQ8WVB3 486 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 SGF29Q96ES7 293 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 SERPINB12Q96P63 405 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 MRM3Q9HC36 420 aaKnown RBP22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 TREX1Q9NSU2 369 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 NEUROG3Q9Y4Z2 214 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 ASXL3Q9C0F0 2248 aa22.38■■□□□ 1.17
SFSWAP-204ENST00000535399 CEP295Q9C0D2 2601 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 OR2AG2A6NM03 316 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 GOLGA8MH3BSY2 632 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 DNALI1O14645 258 aaPredicted RBP22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 CASC3O15234 703 aaKnown RBP22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 SNX2O60749 519 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 POP7O75817 140 aaKnown RBP22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 DBN1Q16643 649 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 BCL7AQ4VC05 210 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 HES3Q5TGS1 186 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 CDCP2Q5VXM1 449 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 MARCH9Q86YJ5 346 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 MPP5Q8N3R9 675 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 DCUN1D1Q96GG9 259 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 SGSM3Q96HU1 749 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 ZNF514Q96K75 400 aaPredicted RBP22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 CCDC3Q9BQI4 270 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 XAB2Q9HCS7 855 aaKnown RBP22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 PRDM8Q9NQV8 689 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 LRIT1Q9P2V4 623 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 SOX13Q9UN79 622 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 DNAJC16Q9Y2G8 782 aa22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 DNMT3AQ9Y6K1 912 aaPredicted RBP22.37■■□□□ 1.17
SFSWAP-204ENST00000535399 ARHGEF17Q96PE2 2063 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms