RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SAE1Q9UBE0 346 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-203ENST00000534830 TMPRSS11EQ9UL52 423 aa9.94□□□□□ -0.82
CLSTN3-203ENST00000534830 VPS4AQ9UN37 437 aa9.94□□□□□ -0.82
CLSTN3-203ENST00000534830 PRKAB1Q9Y478 270 aa9.94□□□□□ -0.82
CLSTN3-203ENST00000534830 PCDHGA3Q9Y5H0 932 aa9.94□□□□□ -0.82
CLSTN3-203ENST00000534830 CRYBG3Q68DQ2 2970 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 FBN2P35556 2912 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 TRBV23OR9-2A0A075B6M9 112 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 hCG_1818297A0A087WSY0 165 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 A0A0A6YYK5 440 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 AURKAO14965 403 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 GRID2O43424 1007 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 CST8O60676 142 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 NDST3O95803 873 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 EPOP01588 193 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 PIRTP0C851 137 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 BPIP17213 487 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 TNFRSF8P28908 595 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 MAGEA1P43355 309 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 DYNLT1P63172 113 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 HHEXQ03014 270 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 TFDP2Q14188 446 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 ESPL1Q14674 2120 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 TFDP3Q5H9I0 405 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF648Q5T619 568 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 WDR74Q6RFH5 385 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 SPOCD1Q6ZMY3 1216 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 KDELC2Q7Z4H8 507 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 SRRM1Q8IYB3 904 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 KATNAL2Q8IYT4 538 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 BMPERQ8N8U9 685 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 TEX19Q8NA77 164 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 DTX3LQ8TDB6 740 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 TFB1MQ8WVM0 346 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 GLYATL1Q969I3 302 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 PMEPA1Q969W9 287 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 TAAR9Q96RI9 348 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 SRPK1Q96SB4 655 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 HERPUD2Q9BSE4 406 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 SPATA16Q9BXB7 569 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 SPRY4Q9C004 299 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 RAD18Q9NS91 495 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 FAM153AQ9UHL3 310 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 SHOC2Q9UQ13 582 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 KCNK6Q9Y257 313 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF711Q9Y462 761 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 SPO11Q9Y5K1 396 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 LRBAP50851 2863 aa9.93□□□□□ -0.82
CLSTN3-203ENST00000534830 CELSR2Q9HCU4 2923 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 KIR2DS5A0A0G2JLQ3 304 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 A0A0G2JNG1 304 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 OR5K4A6NMS3 321 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 B4E171 279 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 KIR2DS3K7RE56 304 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 NKX2-8O15522 239 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 SPOPO43791 374 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 SLC25A14O95258 325 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 RNF224P0DH78 156 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 ACP5P13686 325 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 F3P13726 295 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 XRCC1P18887 633 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 FECHP22830 423 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 HMGCLP35914 325 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 DCTP40126 519 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 TSPAN7P41732 249 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 EPHA4P54764 986 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 UBE2IP63279 158 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 SEPT6Q14141 434 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 KIR2DS5Q14953 304 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 PPP2R5EQ16537 467 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 PCSK7Q16549 785 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 DEFB109BQ30KR1 87 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 KHDC1Q4VXA5 237 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF569Q5MCW4 686 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 CAPRIN2Q6IMN6 1127 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 C11orf63Q6NUN7 778 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 C11orf96Q7Z7L8 435 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 SLC9B2Q86UD5 537 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF761Q86XN6 746 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF547Q8IVP9 402 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 RCOR2Q8IZ40 523 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 CACNA2D3Q8IZS8 1091 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 TTC30BQ8N4P2 665 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 EFCAB3Q8N7B9 438 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 AGBL5Q8NDL9 886 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 APOBEC4Q8WW27 367 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 MRGPRX2Q96LB1 330 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 PLEKHG4BQ96PX9 1271 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 VPS35Q96QK1 796 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 FCRL5Q96RD9 977 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 SLC38A3Q99624 504 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 DDA1Q9BW61 102 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 OR2AG1Q9H205 316 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 GOLPH3Q9H4A6 298 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 UCK1Q9HA47 277 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 ARFGAP3Q9NP61 516 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 PRDM8Q9NQV8 689 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 OCIAD1Q9NX40 245 aa9.92□□□□□ -0.82
CLSTN3-203ENST00000534830 SCHIP1Q9P0W5 487 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms