RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 TPP1O14773 563 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 CHUKO15111 745 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 TNFSF14O43557 240 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 CDK14O94921 469 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 PSMA3P25788 255 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 ACRV1P26436 265 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 ITGA8P53708 1063 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 CDK16Q00536 496 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 ACVR1Q04771 509 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 FOXC1Q12948 553 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 GTF2H3Q13889 308 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.2
VPS11-205ENST00000534551 SEPT7Q16181 437 aaKnown RBP13.83□□□□□ -0.2
VPS11-205ENST00000534551 INSCQ1MX18 579 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 KIF26BQ2KJY2 2108 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 PCID2Q5JVF3 399 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 PERM1Q5SV97 790 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 LDLRAP1Q5SW96 308 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 FNBP1LQ5T0N5 605 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 CASC4Q6P4E1 433 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 AFTPHQ6ULP2 937 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 DHRS13Q6UX07 377 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 TAS2R42Q7RTR8 314 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 EFL1Q7Z2Z2 1120 aaKnown RBP13.83□□□□□ -0.2
VPS11-205ENST00000534551 ZNF572Q7Z3I7 529 aaPredicted RBP13.83□□□□□ -0.2
VPS11-205ENST00000534551 C11orf96Q7Z7L8 435 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 MCUQ8NE86 351 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 ZNF669Q96BR6 464 aaPredicted RBP13.83□□□□□ -0.2
VPS11-205ENST00000534551 RUNDC3BQ96NL0 473 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 FCRL3Q96P31 734 aaPredicted RBP13.83□□□□□ -0.2
VPS11-205ENST00000534551 WDR83Q9BRX9 315 aaKnown RBP13.83□□□□□ -0.2
VPS11-205ENST00000534551 DUSP23Q9BVJ7 150 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 GSDMCQ9BYG8 508 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 DPEP2Q9H4A9 486 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 OSGEPL1Q9H4B0 414 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 BFARQ9NZS9 450 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 RABGEF1Q9UJ41 708 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 SOX13Q9UN79 622 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 SNX24Q9Y343 169 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 PRSS21Q9Y6M0 314 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 CPED1A4D0V7 1026 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 EFCAB8A8MWE9 144 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 VEGFDO43915 354 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 SNX2O60749 519 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 SEC31AO94979 1220 aaKnown RBP13.82□□□□□ -0.2
VPS11-205ENST00000534551 CKMT1AP12532 417 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 MSH3P20585 1137 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 PRAMEP78395 509 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 CACNG1Q06432 222 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 CKAP4Q07065 602 aaKnown RBP13.82□□□□□ -0.2
VPS11-205ENST00000534551 DHX9Q08211 1270 aaKnown RBP13.82□□□□□ -0.2
VPS11-205ENST00000534551 NR0B2Q15466 257 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 SKIDA1Q1XH10 827 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 HP1BP3Q5SSJ5 553 aaPredicted RBP13.82□□□□□ -0.2
VPS11-205ENST00000534551 XKR5Q6UX68 686 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 FAM83HQ6ZRV2 1179 aaPredicted RBP13.82□□□□□ -0.2
VPS11-205ENST00000534551 SYDE1Q6ZW31 735 aaPredicted RBP13.82□□□□□ -0.2
VPS11-205ENST00000534551 LRRTM4Q86VH4 590 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 NAGSQ8N159 534 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 LILRA3Q8N6C8 439 aaPredicted RBP13.82□□□□□ -0.2
VPS11-205ENST00000534551 ARL10Q8N8L6 244 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 OR6P1Q8NGX9 317 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 IFI44Q8TCB0 444 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 DTX3LQ8TDB6 740 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 ZDHHC1Q8WTX9 485 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 ULK4Q96C45 1275 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 SGF29Q96ES7 293 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 KIFC1Q9BW19 673 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 XAB2Q9HCS7 855 aaKnown RBP13.82□□□□□ -0.2
VPS11-205ENST00000534551 KLC4Q9NSK0 619 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 TBC1D29Q9UFV1 150 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 NCOR2Q9Y618 2525 aa13.82□□□□□ -0.2
VPS11-205ENST00000534551 UNC13CQ8NB66 2214 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 TRBV23OR9-2A0A075B6M9 112 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 HYAL3O43820 417 aaPredicted RBP13.81□□□□□ -0.2
VPS11-205ENST00000534551 OR1I1O60431 355 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 RFPL3O75679 317 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 CKMT2P17540 419 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 NPY2RP49146 381 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 SLC7A5Q01650 507 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 NFE2L1Q14494 772 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 TRADDQ15628 312 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 WHAMMP3Q1A5X7 153 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 HIBCHQ6NVY1 386 aaPredicted RBP13.81□□□□□ -0.2
VPS11-205ENST00000534551 TMEM220Q6QAJ8 160 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 ZNF761Q86XN6 746 aaPredicted RBP13.81□□□□□ -0.2
VPS11-205ENST00000534551 IGDCC3Q8IVU1 814 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 SPNS2Q8IVW8 549 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 UNC5BQ8IZJ1 945 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 CLDN19Q8N6F1 224 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 NOA1Q8NC60 698 aaKnown RBP13.81□□□□□ -0.2
VPS11-205ENST00000534551 LKAAEAR1Q8TD35 194 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 CCDC74AQ96AQ1 378 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 SNF8Q96H20 258 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 COPS8Q99627 209 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 ZCCHC2Q9C0B9 1178 aaKnown RBP13.81□□□□□ -0.2
VPS11-205ENST00000534551 RMI1Q9H9A7 625 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 MRM3Q9HC36 420 aaKnown RBP13.81□□□□□ -0.2
VPS11-205ENST00000534551 PRDM8Q9NQV8 689 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms