RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 ARMC8Q8IUR7 673 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 SCN4BQ8IWT1 228 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 TERB1Q8NA31 727 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 SRFBP1Q8NEF9 429 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 RPLP0P6Q8NHW5 317 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 OLIG1Q8TAK6 271 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 ADAMTS15Q8TE58 950 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 DEPDC1BQ8WUY9 529 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 KCNJ9Q92806 393 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 ELP4Q96EB1 424 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 CNOT6LQ96LI5 555 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 NEUROD6Q96NK8 337 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 GPR78Q96P69 363 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 ADGRE3Q9BY15 652 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 RNF26Q9BY78 433 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 SEMA4BQ9NPR2 832 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 SLC25A10Q9UBX3 287 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 SQORQ9Y6N5 450 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 IGSF9BQ9UPX0 1349 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 TCRBV5S1A1TA0A578 114 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 DYTNA2CJ06 578 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 A6NCN8 305 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 C17orf100A8MU93 164 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 MGST3O14880 152 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 AP5Z1O43299 807 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 EXOC3O60645 756 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 METTL18O95568 372 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ALDOCP09972 364 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 RFPL3SP0C7P2 107 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 PRKCHP24723 683 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 CALML3P27482 149 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 PTGER4P35408 488 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 AVPR1BP47901 424 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 CCR9P51686 369 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 GABPAQ06546 454 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF33AQ06730 810 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 DNAJC3Q13217 504 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 SRSF6Q13247 344 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ALKBH1Q13686 389 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF169Q14929 603 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 MFSD13AQ14CX5 517 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 CNGA3Q16281 694 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 HSDL1Q3SXM5 330 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 SPATS1Q496A3 300 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 RUNDC3AQ59EK9 446 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 CLLU1OSQ5K130 101 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 SH2D4BQ5SQS7 431 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 FAM69AQ5T7M9 428 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 NAA35Q5VZE5 725 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 MTFR2Q6P444 385 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 BHLHB9Q6PI77 547 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 SLC22A25Q6T423 547 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 Q6ZPA2 131 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ADGRA1Q86SQ6 560 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 BIVMQ86UB2 503 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 TICAM2Q86XR7 235 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ENDOVQ8N8Q3 282 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 RUFY2Q8WXA3 655 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 TBC1D5Q92609 795 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ATP2A3Q93084 1043 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 CAVIN3Q969G5 261 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 CENPTQ96BT3 561 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF845Q96IR2 970 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 C5orf34Q96MH7 638 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 GATA5Q9BWX5 397 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 INTS2Q9H0H0 1204 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 CYP4F11Q9HBI6 524 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 ASNSD1Q9NWL6 643 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 GTSE1Q9NYZ3 720 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 CROCCQ5TZA2 2017 aa4.67□□□□□ -1.66
ECHDC1-223ENST00000534442 PRKDCP78527 4128 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 PTPRDP23468 1912 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 PRSS44E7EML9 344 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 GUCY1B2O75343 617 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 GFPT2O94808 682 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF202O95125 648 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 EGFP01133 1207 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 ADH4P08319 380 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 CYP2D6P10635 497 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 HSPA5P11021 654 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 CDK4P11802 303 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 NR1D1P20393 614 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 EPHA8P29322 1005 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 MATKP42679 507 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 VPS41P49754 854 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 DYNLL1P63167 89 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 GRSF1Q12849 480 aaKnown RBP eCLIP4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 PTP4A2Q12974 167 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 ERV3-1Q14264 604 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 SEC23BQ15437 767 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF766Q5HY98 468 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 NAPEPLDQ6IQ20 393 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 C16orf54Q6UWD8 224 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 RTL10Q7L3V2 364 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 ULK2Q8IYT8 1036 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 ZCCHC10Q8TBK6 192 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 C2CD4CQ8TF44 421 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 HDAC11Q96DB2 347 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 SPATA33Q96N06 139 aa4.66□□□□□ -1.66
ECHDC1-223ENST00000534442 CAMK2AQ9UQM7 478 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms