RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 KLHL6Q8WZ60 621 aa20.98■□□□□ 0.95
SSH3-211ENST00000534112 GLYATL1Q969I3 302 aa20.98■□□□□ 0.95
SSH3-211ENST00000534112 TWSG1Q9GZX9 223 aa20.98■□□□□ 0.95
SSH3-211ENST00000534112 LNPEPQ9UIQ6 1025 aa20.98■□□□□ 0.95
SSH3-211ENST00000534112 DNAJC16Q9Y2G8 782 aa20.98■□□□□ 0.95
SSH3-211ENST00000534112 PCDHGA6Q9Y5G7 932 aa20.98■□□□□ 0.95
SSH3-211ENST00000534112 BZW2Q9Y6E2 419 aaKnown RBP20.98■□□□□ 0.95
SSH3-211ENST00000534112 A0A1B0GTH6 734 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 CDC14CA4D256 554 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 KCNK1O00180 336 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 CREG1O75629 220 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 BRAFP15056 766 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 RPL10P27635 214 aaKnown RBP20.97■□□□□ 0.95
SSH3-211ENST00000534112 PMS2P54278 862 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 DCDC1P59894 354 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 PDK2Q15119 407 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.97■□□□□ 0.95
SSH3-211ENST00000534112 ANO6Q4KMQ2 910 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 CACHD1Q5VU97 1274 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 ABRAXAS1Q6UWZ7 409 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 LRRTM4Q86VH4 590 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 CPNE8Q86YQ8 564 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 TRAM1L1Q8N609 369 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 CNTD1Q8N815 330 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 RSC1A1Q92681 617 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 FAF2Q96CS3 445 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 HDAC11Q96DB2 347 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 ZDHHC12Q96GR4 267 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 TIMM29Q9BSF4 260 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 LRRC4CQ9HCJ2 640 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 SLC40A1Q9NP59 571 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 POT1Q9NUX5 634 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 SHOC2Q9UQ13 582 aa20.97■□□□□ 0.95
SSH3-211ENST00000534112 OR52A4PA6NMU1 304 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 SMTNL1A8MU46 457 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 MTX2O75431 263 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 RECKO95980 971 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 PIRTP0C851 137 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 CAPZBP47756 277 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 DNASE1L3Q13609 305 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 FIGNQ5HY92 759 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 PDPK2PQ6A1A2 396 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 FAM92BQ6ZTR7 304 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 TMC3Q7Z5M5 1100 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 PPP1R3BQ86XI6 285 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 ZNF547Q8IVP9 402 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 MAP7D3Q8IWC1 876 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 TRIB3Q96RU7 358 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 BPIFA3Q9BQP9 254 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 RAD18Q9NS91 495 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 EPHA6Q9UF33 1036 aa20.96■□□□□ 0.95
SSH3-211ENST00000534112 A0A087X0T9 212 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 PDGFAP04085 211 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 FAM228BP0C875 321 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 NELFEP18615 380 aaKnown RBP20.95■□□□□ 0.94
SSH3-211ENST00000534112 ZBTB17Q13105 803 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 GPR18Q14330 331 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 NR1I3Q14994 352 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 WASH2PQ6VEQ5 465 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 APLFQ8IW19 511 aaPredicted RBP20.95■□□□□ 0.94
SSH3-211ENST00000534112 RBM12BQ8IXT5 1001 aaKnown RBP20.95■□□□□ 0.94
SSH3-211ENST00000534112 CT55Q8WUE5 264 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 MAGEE1Q9HCI5 957 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 LHX9Q9NQ69 397 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 WASH6PQ9NQA3 447 aa20.95■□□□□ 0.94
SSH3-211ENST00000534112 NFKBIL1Q9UBC1 381 aaPredicted RBP20.95■□□□□ 0.94
SSH3-211ENST00000534112 C21orf140B9A014 251 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 VEGFDO43915 354 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 CDK14O94921 469 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 SLC4A1P02730 911 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 MT-ND3P03897 115 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 IDSP22304 550 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 CASP14P31944 242 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 DRG2P55039 364 aaKnown RBP20.94■□□□□ 0.94
SSH3-211ENST00000534112 TAS2R40P59535 323 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 IFI35P80217 286 aaPredicted RBP20.94■□□□□ 0.94
SSH3-211ENST00000534112 PPIDQ08752 370 aaKnown RBP20.94■□□□□ 0.94
SSH3-211ENST00000534112 KHDC1Q4VXA5 237 aaKnown RBP20.94■□□□□ 0.94
SSH3-211ENST00000534112 FAM182AQ5T1J6 154 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 AGAP9Q5VTM2 703 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 IRGCQ6NXR0 463 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 SYN2Q92777 582 aaPredicted RBP20.94■□□□□ 0.94
SSH3-211ENST00000534112 CXorf40BQ96DE9 158 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 GBP4Q96PP9 640 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 RAB33BQ9H082 229 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 BRD8Q9H0E9 1235 aa20.94■□□□□ 0.94
SSH3-211ENST00000534112 ICE1Q9Y2F5 2266 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 DNAJB5O75953 348 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 TIAF1O95411 115 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 SERPING1P05155 500 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 BPIP17213 487 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 UQCRFS1P47985 274 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 SEMA5AQ13591 1074 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 NFKBIBQ15653 356 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 ALKBH5Q6P6C2 394 aaKnown RBP20.93■□□□□ 0.94
SSH3-211ENST00000534112 CYB5D1Q6P9G0 228 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 IMP4Q96G21 291 aaKnown RBP20.93■□□□□ 0.94
SSH3-211ENST00000534112 ZNF830Q96NB3 372 aaPredicted RBP20.93■□□□□ 0.94
SSH3-211ENST00000534112 TRIM55Q9BYV6 548 aa20.93■□□□□ 0.94
SSH3-211ENST00000534112 GPR63Q9BZJ6 419 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms