RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 PACS1Q6VY07 963 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 KDM7AQ6ZMT4 941 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 KIAA0408Q6ZU52 694 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 C3orf62Q6ZUJ4 267 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 CYS1Q717R9 158 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 MARK2Q7KZI7 788 aaKnown RBP13.92□□□□□ -0.18
CMTM1-217ENST00000533666 ADGRG6Q86SQ4 1221 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 TRAPPC5Q8IUR0 188 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 IGDCC3Q8IVU1 814 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 MINDY1Q8N5J2 469 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 OR1E3Q8WZA6 343 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 TCEAL3Q969E4 200 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 TSACCQ96A04 125 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-217ENST00000533666 SCARF2Q96GP6 870 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-217ENST00000533666 OR2M4Q96R27 311 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 EDEM2Q9BV94 578 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 GSDMCQ9BYG8 508 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 CLPBQ9H078 707 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 FGF22Q9HCT0 170 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 INTS10Q9NVR2 710 aaKnown RBP13.92□□□□□ -0.18
CMTM1-217ENST00000533666 TRNAU1APQ9NX07 287 aaKnown RBP13.92□□□□□ -0.18
CMTM1-217ENST00000533666 ZFATQ9P243 1243 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 SUFUQ9UMX1 484 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 GPR34Q9UPC5 381 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 DOLKQ9UPQ8 538 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 GPSM3Q9Y4H4 160 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 DNMT3AQ9Y6K1 912 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-217ENST00000533666 OAS3Q9Y6K5 1087 aaKnown RBP13.92□□□□□ -0.18
CMTM1-217ENST00000533666 LAMA1P25391 3075 aa13.92□□□□□ -0.18
CMTM1-217ENST00000533666 IGLV3-16A0A075B6K0 115 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 H3BMM5 538 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 OR56A5P0C7T3 313 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 ALPPL2P10696 532 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 ZNF8P17098 575 aaPredicted RBP13.91□□□□□ -0.18
CMTM1-217ENST00000533666 ARNTP27540 789 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 POLD2P49005 469 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 BNC1Q01954 994 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 MGAT5Q09328 741 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 SLC14A1Q13336 389 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 FASTKD3Q14CZ7 662 aaKnown RBP13.91□□□□□ -0.18
CMTM1-217ENST00000533666 HSP90AA5PQ58FG0 334 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 PRRT3Q5FWE3 981 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 TPRG1LQ5T0D9 272 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 GKN2Q86XP6 184 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 CILP2Q8IUL8 1156 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 PIANPQ8IYJ0 282 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 FAM122AQ96E09 287 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 PDXPQ96GD0 296 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 C9orf72Q96LT7 481 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 PHOX2BQ99453 314 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 CCDC68Q9H2F9 335 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 ANKZF1Q9H8Y5 726 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 ARFGAP3Q9NP61 516 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 DNAAF2Q9NVR5 837 aaKnown RBP13.91□□□□□ -0.18
CMTM1-217ENST00000533666 TXNDC16Q9P2K2 825 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 TMPRSS11EQ9UL52 423 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 PCDHB1Q9Y5F3 818 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 PCDHGB2Q9Y5G2 931 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 CSNK1G3Q9Y6M4 447 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 PIKFYVEQ9Y2I7 2098 aa13.91□□□□□ -0.18
CMTM1-217ENST00000533666 BPTFQ12830 3046 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 PLXNB3Q9ULL4 1909 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 GOLGA8KD6RF30 607 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 GOLGA8TH3BQL2 631 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 PRMT5O14744 637 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 CHUKO15111 745 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 GPR39O43194 453 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 PCDHGA12O60330 932 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 MTX2O75431 263 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 PIAS2O75928 621 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 FTH1P02794 183 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 ERVK-10P10266 1014 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 EPHA8P29322 1005 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 ECHS1P30084 290 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 CDKN1CP49918 316 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 TYSND1Q2T9J0 566 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 BCL7AQ4VC05 210 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 PYCR3Q53H96 274 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 ZNF542PQ5EBM4 170 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 WDR93Q6P2C0 686 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 TMEM220Q6QAJ8 160 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 CCNI2Q6ZMN8 369 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 TRMT10CQ7L0Y3 403 aaKnown RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 DCLK2Q8N568 766 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 RASGEF1AQ8N9B8 481 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 LMX1AQ8TE12 382 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 TRIM56Q9BRZ2 755 aaKnown RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 TIMM29Q9BSF4 260 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 PARD6AQ9NPB6 346 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 MRPL40Q9NQ50 206 aaKnown RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 FSCN3Q9NQT6 498 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 TM7SF3Q9NS93 570 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 GNPTGQ9UJJ9 305 aa13.9□□□□□ -0.18
CMTM1-217ENST00000533666 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 GOLGA4Q13439 2230 aaKnown RBP13.9□□□□□ -0.18
CMTM1-217ENST00000533666 TMEM131Q92545 1883 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms