RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SERPINA9Q86WD7 417 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 SFTPA2Q8IWL1 248 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 KIF18AQ8NI77 898 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 SNF8Q96H20 258 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 SGSM3Q96HU1 749 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 SIGLEC10Q96LC7 697 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 TTC25Q96NG3 672 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 TRIM31Q9BZY9 425 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 ZCCHC2Q9C0B9 1178 aaKnown RBP11.83□□□□□ -0.52
SSBP3-214ENST00000533209 TAAR2Q9P1P5 351 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 SLC23A2Q9UGH3 650 aa11.83□□□□□ -0.52
SSBP3-214ENST00000533209 ZNF106Q9H2Y7 1883 aaKnown RBP11.83□□□□□ -0.52
SSBP3-214ENST00000533209 PRR19A6NJB7 356 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 KMOO15229 486 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 SGTAO43765 313 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 NOBOXO60393 691 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 CKMT1AP12532 417 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ZNF7P17097 686 aaPredicted RBP11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ACP1P24666 158 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ACRV1P26436 265 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 AKT1P31749 480 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ACTR1BP42025 376 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 CLCNKAP51800 687 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ITGA8P53708 1063 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ACTR1AP61163 376 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 TUBB2AQ13885 445 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 GTF2H3Q13889 308 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 MORF4L2Q15014 288 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 DBN1Q16643 649 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 MSS51Q4VC12 460 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 FNBP1LQ5T0N5 605 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 N4BP2L1Q5TBK1 243 aaPredicted RBP11.82□□□□□ -0.52
SSBP3-214ENST00000533209 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 TMEM220Q6QAJ8 160 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 LRRTM4Q86VH4 590 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 TRAPPC5Q8IUR0 188 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ARL10Q8N8L6 244 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 PNPLA1Q8N8W4 532 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 KYQ8NBH2 561 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 GPR156Q8NFN8 814 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 OR6P1Q8NGX9 317 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 OR4L1Q8NH43 312 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 NAT14Q8WUY8 206 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 MFSD3Q96ES6 412 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 SGF29Q96ES7 293 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 COPS8Q99627 209 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 TRIM56Q9BRZ2 755 aaKnown RBP11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ERP44Q9BS26 406 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 TUBB2BQ9BVA1 445 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 ZDHHC3Q9NYG2 299 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 SIRPGQ9P1W8 387 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 KCNK6Q9Y257 313 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
SSBP3-214ENST00000533209 FAM237BA0A1B0GVD1 139 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 MAGEB16A2A368 324 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 OR2AG2A6NM03 316 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 B4DGG1 531 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 SMAPO00193 183 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 BANF1O75531 89 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 ARNTP27540 789 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 DUSP3P51452 185 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-214ENST00000533209 PRAMEP78395 509 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 DAB2P98082 770 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 SEMA3AQ14563 771 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 NR0B2Q15466 257 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 PLA2G4EQ3MJ16 856 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 BCL7AQ4VC05 210 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 CASC4Q6P4E1 433 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 GUSBP11Q6P575 273 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 DET1Q7L5Y6 550 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 C17orf82Q86X59 251 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-214ENST00000533209 NAGSQ8N159 534 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 ZDHHC1Q8WTX9 485 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 HEXDCQ8WVB3 486 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 GLMNQ92990 594 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 DCUN1D1Q96GG9 259 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 ZNF514Q96K75 400 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-214ENST00000533209 PWWP2AQ96N64 755 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 TIMM29Q9BSF4 260 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 DPEP2Q9H4A9 486 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 KLC4Q9NSK0 619 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 NCKIPSDQ9NZQ3 722 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 SAMD15Q9P1V8 674 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 MARCH4Q9P2E8 410 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-214ENST00000533209 GULP1Q9UBP9 304 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 TBC1D29Q9UFV1 150 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 ANAPC5Q9UJX4 755 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 PADI4Q9UM07 663 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 APOBEC2Q9Y235 224 aaKnown RBP11.81□□□□□ -0.52
SSBP3-214ENST00000533209 PCDHGA1Q9Y5H4 931 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 DNMT3AQ9Y6K1 912 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-214ENST00000533209 NCOR2Q9Y618 2525 aa11.81□□□□□ -0.52
SSBP3-214ENST00000533209 ZCWPW2A0A1B0GU75 182 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 CPED1A4D0V7 1026 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 EME2A4GXA9 379 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 A6NCN8 305 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 CFAP99D6REC4 459 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 RFPL3O75679 317 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 POP7O75817 140 aaKnown RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 VAPBO95292 243 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms