RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 DHPSP49366 369 aaPredicted RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 AFF3P51826 1226 aaKnown RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 ELOAQ14241 798 aaKnown RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 NFATC4Q14934 902 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 TEAD4Q15561 434 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 TEDDM1Q5T9Z0 273 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 MACC1Q6ZN28 852 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 PTAR1Q7Z6K3 402 aaPredicted RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 SERPINA9Q86WD7 417 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 HEATR4Q86WZ0 1026 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 LRRC6Q86X45 466 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 SYT12Q8IV01 421 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 RGL4Q8IZJ4 473 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 PELI3Q8N2H9 469 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 C2CD4AQ8NCU7 369 aaPredicted RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 FUBP1Q96AE4 644 aaKnown RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 KLHDC7BQ96G42 594 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 SLC6A18Q96N87 628 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 COPS8Q99627 209 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 ACSS3Q9H6R3 686 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 VPS37BQ9H9H4 285 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 PPCSQ9HAB8 311 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 TRIM39Q9HCM9 518 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 FETUBQ9UGM5 382 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 TMPRSS11EQ9UL52 423 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 RAB23Q9ULC3 237 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 CORO1CQ9ULV4 474 aaPredicted RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 THADAQ6YHU6 1953 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 KLHL33A6NCF5 533 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 OR51F1A6NGY5 319 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 MEN1O00255 615 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A9O60656 530 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 AP2A2O94973 939 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 SLC25A14O95258 325 aaPredicted RBP12.37□□□□□ -0.43
COPB1-208ENST00000532088 GSTM1P09488 218 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 ZNF7P17097 686 aaPredicted RBP12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A6P19224 532 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A1P22309 533 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A4P22310 534 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 RPS3P23396 243 aaKnown RBP eCLIP12.37□□□□□ -0.43
COPB1-208ENST00000532088 ITPKAP23677 461 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A3P35503 534 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A5P35504 534 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 NSG1P42857 185 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 LEPRP48357 1165 aaKnown RBP12.37□□□□□ -0.43
COPB1-208ENST00000532088 GSTM4Q03013 218 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 KLHL38Q2WGJ6 581 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 HSP90AA5PQ58FG0 334 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 GPRC6AQ5T6X5 926 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 LAIR1Q6GTX8 287 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 PSAPL1Q6NUJ1 521 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 TRMT10BQ6PF06 316 aaKnown RBP12.37□□□□□ -0.43
COPB1-208ENST00000532088 Q6ZSR6 202 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 MARK2Q7KZI7 788 aaKnown RBP12.37□□□□□ -0.43
COPB1-208ENST00000532088 PIANPQ8IYJ0 282 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 RBFAQ8N0V3 343 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 DEFB119Q8N690 84 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 FBF1Q8TES7 1133 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 SCARF2Q96GP6 870 aaPredicted RBP12.37□□□□□ -0.43
COPB1-208ENST00000532088 ZNF514Q96K75 400 aaPredicted RBP12.37□□□□□ -0.43
COPB1-208ENST00000532088 CYTH2Q99418 400 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A7Q9HAW7 530 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A10Q9HAW8 530 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 UGT1A8Q9HAW9 530 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 AASDHPPTQ9NRN7 309 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 ARGLU1Q9NWB6 273 aaPredicted RBP12.37□□□□□ -0.43
COPB1-208ENST00000532088 ZFATQ9P243 1243 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 FBXO5Q9UKT4 447 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 SLC17A4Q9Y2C5 497 aa12.37□□□□□ -0.43
COPB1-208ENST00000532088 SPTY2D1-AS1A0A0U1RR47 76 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 H0Y8X5 98 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 H3BMM5 538 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 ACSL3O95573 720 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 IVLP07476 585 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 NUDT17P0C025 328 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 THEGLP0DJG4 465 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 ERVK-10P10266 1014 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 PMLP29590 882 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 GPC1P35052 558 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 NBL1P41271 181 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 SLC1A2P43004 574 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 RNF144AP50876 292 aaPredicted RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 THOP1P52888 689 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 CSE1LP55060 971 aaKnown RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 CLDN2P57739 230 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 SEMA3AQ14563 771 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 DBN1Q16643 649 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 DUOXA1Q1HG43 343 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 ZNF470Q6ECI4 717 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 PRR23BQ6ZRT6 265 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 ARMCX6Q7L4S7 300 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 TAS2R42Q7RTR8 314 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 ADGRG6Q86SQ4 1221 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 ABCA7Q8IZY2 2146 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 OXR1Q8N573 874 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 OR13H1Q8NG92 308 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 OR56A4Q8NGH8 313 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 DCUN1D1Q96GG9 259 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms