RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 MAGEB16A2A368 324 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 FAM187AA6NFU0 413 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 EFCAB8A8MWE9 144 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 B4DGG1 531 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 TRIM16O95361 564 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 CDK4P11802 303 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 CA5AP35218 305 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 ILKQ13418 452 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 MORF4L2Q15014 288 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 N4BP2L1Q5TBK1 243 aaPredicted RBP20.52■□□□□ 0.88
CCS-207ENST00000531990 SERPINA9Q86WD7 417 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 SLC35F3Q8IY50 421 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 RASGEF1AQ8N9B8 481 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 OR4L1Q8NH43 312 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 SNF8Q96H20 258 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 ZNF778Q96MU6 729 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 TRIM31Q9BZY9 425 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 ZDHHC3Q9NYG2 299 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 ANAPC5Q9UJX4 755 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 SOX13Q9UN79 622 aa20.52■□□□□ 0.88
CCS-207ENST00000531990 PCYT1BQ9Y5K3 369 aaPredicted RBP20.52■□□□□ 0.88
CCS-207ENST00000531990 SPTBN2O15020 2390 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 ARHGEF17Q96PE2 2063 aaPredicted RBP20.51■□□□□ 0.87
CCS-207ENST00000531990 CPED1A4D0V7 1026 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 RFPL3O75679 317 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 GOT2P00505 430 aaKnown RBP20.51■□□□□ 0.87
CCS-207ENST00000531990 ZNF7P17097 686 aaPredicted RBP20.51■□□□□ 0.87
CCS-207ENST00000531990 PAMP19021 973 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 ACRV1P26436 265 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 IVDP26440 423 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 PPARGP37231 505 aaPredicted RBP20.51■□□□□ 0.87
CCS-207ENST00000531990 ACADVLP49748 655 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 FASTKD1Q53R41 847 aaKnown RBP20.51■□□□□ 0.87
CCS-207ENST00000531990 LYPLAL1Q5VWZ2 237 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 OGFOD3Q6PK18 319 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 TMEM220Q6QAJ8 160 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 SLCO6A1Q86UG4 719 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 KYQ8NBH2 561 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 BBOF1Q8ND07 529 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 OR6C4Q8NGE1 309 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 ZDHHC1Q8WTX9 485 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 NAT6Q93015 286 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 TIMM29Q9BSF4 260 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 KLC4Q9NSK0 619 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 TREX1Q9NSU2 369 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 SPATS2LQ9NUQ6 558 aaKnown RBP20.51■□□□□ 0.87
CCS-207ENST00000531990 PADI4Q9UM07 663 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 KCNK6Q9Y257 313 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 CACNA1AO00555 2505 aa20.51■□□□□ 0.87
CCS-207ENST00000531990 OR51F1A6NGY5 319 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 OR2AG2A6NM03 316 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 KCNJ13O60928 360 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 MYF5P13349 255 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 NMBRP28336 390 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 FOXN2P32314 431 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 CDKN1CP49918 316 aaPredicted RBP20.5■□□□□ 0.87
CCS-207ENST00000531990 BIRC2Q13490 618 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 PLA2G4EQ3MJ16 856 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 DNAJC21Q5F1R6 531 aaKnown RBP20.5■□□□□ 0.87
CCS-207ENST00000531990 AARS2Q5JTZ9 985 aaKnown RBP20.5■□□□□ 0.87
CCS-207ENST00000531990 FNBP1LQ5T0N5 605 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 DET1Q7L5Y6 550 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 ZNF547Q8IVP9 402 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 MNS1Q8NEH6 495 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 GPR156Q8NFN8 814 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 SGSM3Q96HU1 749 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 OSGEPL1Q9H4B0 414 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 TOR4AQ9NXH8 423 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 ST14Q9Y5Y6 855 aa20.5■□□□□ 0.87
CCS-207ENST00000531990 DNMT3AQ9Y6K1 912 aaPredicted RBP20.5■□□□□ 0.87
CCS-207ENST00000531990 LY6G6EA0A0G2JKS1 128 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 FAM237BA0A1B0GVD1 139 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 RAD51CO43502 376 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 SEC31AO94979 1220 aaKnown RBP20.49■□□□□ 0.87
CCS-207ENST00000531990 SLC2A4P14672 509 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 MAGEA3P43357 314 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 CLCNKAP51800 687 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 CTSCP53634 463 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 ITGA8P53708 1063 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 ITIH4Q14624 930 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 C14orf28Q4W4Y0 310 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 CERS6Q6ZMG9 384 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 EFL1Q7Z2Z2 1120 aaKnown RBP20.49■□□□□ 0.87
CCS-207ENST00000531990 AMZ2Q86W34 360 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 PIANPQ8IYJ0 282 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 PDIK1LQ8N165 341 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 MPP5Q8N3R9 675 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 PNPLA1Q8N8W4 532 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 IFI44Q8TCB0 444 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 SGF29Q96ES7 293 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 ERP44Q9BS26 406 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 RAB17Q9H0T7 212 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 CATSPERZQ9NTU4 200 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 DNAJC16Q9Y2G8 782 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 MRFAP1Q9Y605 127 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 MAD1L1Q9Y6D9 718 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 U3KQA8 63 aa20.49■□□□□ 0.87
CCS-207ENST00000531990 IGLV3-16A0A075B6K0 115 aa20.48■□□□□ 0.87
CCS-207ENST00000531990 EME2A4GXA9 379 aaPredicted RBP20.48■□□□□ 0.87
CCS-207ENST00000531990 KLHL33A6NCF5 533 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms