RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 SDHBP21912 280 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 ANXA13P27216 316 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 POU1F1P28069 291 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 PTPN7P35236 360 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 TGM3Q08188 693 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 C9orf50Q5SZB4 431 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 C18orf63Q68DL7 685 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 KRT27Q7Z3Y8 459 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 OFCC1Q8IZS5 231 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 FADS6Q8N9I5 356 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 RNF169Q8NCN4 708 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 C11orf65Q8NCR3 313 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CLEC4CQ8WTT0 213 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 RLN3Q8WXF3 142 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 SHISA4Q96DD7 197 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 ARHGEF26Q96DR7 871 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 PWWP2AQ96N64 755 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 HS3ST6Q96QI5 342 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 PANX3Q96QZ0 392 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 TMEM168Q9H0V1 697 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 RNF208Q9H0X6 261 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 OR10A5Q9H207 317 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 SLC26A1Q9H2B4 701 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 IL17BQ9UHF5 180 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 ZNF148Q9UQR1 794 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 NPC1L1Q9UHC9 1359 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 E9PCH4 1651 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 TCRBV7S2A1N4TA0A589 114 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 MEI4A8MW99 385 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 KIAA0391O15091 583 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 ITGA10O75578 1167 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CRTAPO75718 401 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 WISP1O95388 367 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CXCL10P02778 98 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CHRM4P08173 479 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 G6PDP11413 515 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 PRPS2P11908 318 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 PNLIPP16233 465 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 DNASE1P24855 282 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CD1BP29016 333 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 TIA1P31483 386 aaKnown RBP eCLIP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 GNAQP50148 359 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CDH13P55290 713 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 BASP1P80723 227 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 B4GALNT1Q00973 533 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CDK18Q07002 472 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 ACSM2AQ08AH3 577 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 TUBA3CQ13748 450 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 IL18Q14116 193 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 SYT16Q17RD7 645 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 MPPE1Q53F39 396 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 PIP5KL1Q5T9C9 394 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CD276Q5ZPR3 534 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 ACSM2BQ68CK6 577 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 ZNF772Q68DY9 489 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 TMEM211Q6ICI0 200 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CASC4Q6P4E1 433 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 C17orf99Q6UX52 265 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 PPP1R32Q7Z5V6 425 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CYP4X1Q8N118 509 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CRYBG2Q8N1P7 616 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 OR52B4Q8NGK2 314 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 FAM110DQ8TAY7 271 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 DNAJB14Q8TBM8 379 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 DNAAF4Q8WXU2 420 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 SCAMP4Q969E2 229 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 SPSB1Q96BD6 273 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 AP2M1Q96CW1 435 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 ZBED3Q96IU2 234 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 LRFN5Q96NI6 719 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 OR1F2PQ96R84 312 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 C1QTNF1Q9BXJ1 281 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 FRMD8P1Q9BZ68 369 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 UBQLN3Q9H347 655 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 TDRD3Q9H7E2 651 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CYP3A43Q9HB55 503 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 RANGRFQ9HD47 186 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 SLC23A1Q9UHI7 598 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 A4GNTQ9UNA3 340 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 EVC2Q86UK5 1308 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 FHOD3Q2V2M9 1422 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 FGD6Q6ZV73 1430 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 SNAPC4Q5SXM2 1469 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 CCDC18Q5T9S5 1454 aa5.19□□□□□ -1.58
ECHDC1-222ENST00000531967 BTBD17A6NE02 478 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 MAGEB17A8MXT2 336 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 NEBLO76041 1014 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 MOCS3O95396 460 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 CYBBP04839 570 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 GLAP06280 429 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 CRYGCP07315 174 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 CSF1RP07333 972 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 ASNSP08243 561 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 OR8G3PP0DMU2 310 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 BMP4P12644 408 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 ATP6V1C1P21283 382 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 MSNP26038 577 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 KLRC2P26717 231 aa5.18□□□□□ -1.58
ECHDC1-222ENST00000531967 RBL1P28749 1068 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms