RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 GTF2H3Q13889 308 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 FASTKD3Q14CZ7 662 aaKnown RBP13.46□□□□□ -0.25
FDFT1-219ENST00000531249 FASTKD1Q53R41 847 aaKnown RBP13.46□□□□□ -0.25
FDFT1-219ENST00000531249 KIAA0930Q6ICG6 404 aaPredicted RBP13.46□□□□□ -0.25
FDFT1-219ENST00000531249 CRTC3Q6UUV7 619 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 DET1Q7L5Y6 550 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 LDB1Q86U70 411 aaPredicted RBP13.46□□□□□ -0.25
FDFT1-219ENST00000531249 CCDC25Q86WR0 208 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 GALNT13Q8IUC8 556 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 ZNF548Q8NEK5 533 aaPredicted RBP13.46□□□□□ -0.25
FDFT1-219ENST00000531249 SAP25Q8TEE9 199 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■□□ 16.4
FDFT1-219ENST00000531249 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
FDFT1-219ENST00000531249 DCUN1D1Q96GG9 259 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 SAYSD1Q9NPB0 183 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 FAM114A2Q9NRY5 505 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 CATSPERZQ9NTU4 200 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 VPS18Q9P253 973 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 SPASTQ9UBP0 616 aa13.46□□□□□ -0.25
FDFT1-219ENST00000531249 ZNF106Q9H2Y7 1883 aaKnown RBP13.46□□□□□ -0.26
FDFT1-219ENST00000531249 DNAH14Q0VDD8 3507 aa13.46□□□□□ -0.26
FDFT1-219ENST00000531249 TDRD6O60522 2096 aaKnown RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 TRBV5-4A0A0C4DH59 114 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ZCWPW2A0A1B0GU75 182 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 OR2AG2A6NM03 316 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 AGAP14A8MT82 685 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 BHMG1C9JSJ3 638 aaPredicted RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 CD3EAPO15446 510 aaKnown RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 AQP9O43315 295 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 GRID2O43424 1007 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 VEGFDO43915 354 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 NUAK1O60285 661 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 DNAJC6O75061 913 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 USP1O94782 785 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ZNF883P0CG24 379 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ACRV1P26436 265 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ARNTP27540 789 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 OAS2P29728 719 aaKnown RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 HLTFQ14527 1009 aaKnown RBP eCLIP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 SEMA3AQ14563 771 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 CRYMQ14894 314 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 SUZ12Q15022 739 aaKnown RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 TERF2Q15554 542 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 DBN1Q16643 649 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 PLA2G4EQ3MJ16 856 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 PYCR3Q53H96 274 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ARMC3Q5W041 872 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 CENPUQ71F23 418 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 TMEM135Q86UB9 458 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ZBED8Q8IZ13 594 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 UNC5BQ8IZJ1 945 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 SLC25A45Q8N413 288 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 RASGEF1AQ8N9B8 481 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 FBXO36Q8NEA4 188 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 CCL4L1Q8NHW4 92 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 SETD7Q8WTS6 366 aaKnown RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 SEC14L1Q92503 715 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 SCARF2Q96GP6 870 aaPredicted RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 OR2M4Q96R27 311 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 COPS8Q99627 209 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 WDR83Q9BRX9 315 aaKnown RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 BOCQ9BWV1 1114 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ZCCHC2Q9C0B9 1178 aaKnown RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 CLPBQ9H078 707 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 C20orf96Q9NUD7 363 aaPredicted RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ZDHHC3Q9NYG2 299 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 MARCH4Q9P2E8 410 aaPredicted RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 ZC3H7BQ9UGR2 993 aaKnown RBP13.45□□□□□ -0.26
FDFT1-219ENST00000531249 TEX264Q9Y6I9 313 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 BPTFQ12830 3046 aa13.45□□□□□ -0.26
FDFT1-219ENST00000531249 CFAP99D6REC4 459 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 E7ESA3 106 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 SH3BP5O60239 455 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 PCDHGA12O60330 932 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 RALBP11234 206 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 ACP5P13686 325 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 CD59P13987 128 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 AK4P27144 223 aaPredicted RBP13.44□□□□□ -0.26
FDFT1-219ENST00000531249 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
FDFT1-219ENST00000531249 CTSCP53634 463 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 ARHGAP8P85298 464 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 B4GALNT1Q00973 533 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 THOC5Q13769 683 aaKnown RBP13.44□□□□□ -0.26
FDFT1-219ENST00000531249 ELOCQ15369 112 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 DEFB133Q30KQ1 61 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 TMEM220Q6QAJ8 160 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 UNC5AQ6ZN44 842 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 CAPN12Q6ZSI9 719 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 KANSL1Q7Z3B3 1105 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 TAF8Q7Z7C8 310 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 LRRTM4Q86VH4 590 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 EID2Q8N6I1 236 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
FDFT1-219ENST00000531249 NETO1Q8TDF5 533 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 AENQ8WTP8 325 aaKnown RBP13.44□□□□□ -0.26
FDFT1-219ENST00000531249 CAVIN3Q969G5 261 aa13.44□□□□□ -0.26
FDFT1-219ENST00000531249 LRRC39Q96DD0 335 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms