RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ALDH16A1Q8IZ83 802 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 VWA5B2Q8N398 1253 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 ZBTB2Q8N680 514 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 CCDC185Q8N715 623 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 EMC1Q8N766 993 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 SHC3Q92529 594 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 TM9SF4Q92544 642 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 SGSM3Q96HU1 749 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 SLC41A2Q96JW4 573 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 CEP63Q96MT8 703 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 FCRL4Q96PJ5 515 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 MAGEB5Q9BZ81 275 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 SCAND2PQ9GZW5 306 aaPredicted RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 CHST8Q9H2A9 424 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 WASH6PQ9NQA3 447 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 METTL5Q9NRN9 209 aaKnown RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 TMEM63CQ9P1W3 806 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 CD84Q9UIB8 345 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 TMEM59LQ9UK28 342 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 TCFL5Q9UL49 500 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 PRKAB1Q9Y478 270 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 SLC30A1Q9Y6M5 507 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 FAM237AA0A1B0GTK4 181 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 A0A1W2PNR3 127 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 NPIPB15A6NHN6 443 aaPredicted RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 WASH4PA8MWX3 477 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 J3KR12 359 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 KCNN4O15554 427 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 SNX2O60749 519 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 PRAMEF11O60813 436 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 DNAJC6O75061 913 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 F13A1P00488 732 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 RAB40ALP0C0E4 278 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 EBLN1P0CF75 366 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 FOLR1P15328 257 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 AMD1P17707 334 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 CAPN3P20807 821 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 EPHB2P29323 1055 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 CDH5P33151 784 aaPredicted RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 AP1S1P61966 158 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 PPP1CAP62136 330 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 POLR2LP62875 67 aaKnown RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 DPTQ07507 201 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 ZNF235Q14590 738 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 MYBPC3Q14896 1274 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 C2CD6Q53TS8 623 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 CHST15Q7LFX5 561 aaPredicted RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 MRGPREQ86SM8 312 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 RAB43Q86YS6 212 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 TRIM59Q8IWR1 403 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 ZNF808Q8N4W9 903 aaPredicted RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 LZTR1Q8N653 840 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 ARFGAP1Q8N6T3 406 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 SIDT2Q8NBJ9 832 aaKnown RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 GRHL3Q8TE85 626 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 COX14Q96I36 57 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 ZNF514Q96K75 400 aaPredicted RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 NSMCE3Q96MG7 304 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 TRAPPC9Q96Q05 1148 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 SLX1AQ9BQ83 275 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 WDR77Q9BQA1 342 aaPredicted RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 CINPQ9BW66 212 aaPredicted RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 VPS18Q9P253 973 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 SUCOQ9UBS9 1254 aaKnown RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 AJAP1Q9UKB5 411 aaPredicted RBP8.08□□□□□ -1.12
CD44-232ENST00000531118 CSAG2Q9Y5P2 127 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 JMJD1CQ15652 2540 aa8.08□□□□□ -1.12
CD44-232ENST00000531118 AKAP6Q13023 2319 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 OR5K4A6NMS3 321 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 SCRG1O75711 98 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 FAM155BO75949 473 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 ASMTLO95671 621 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 PNMA6AP0CW24 399 aaPredicted RBP8.07□□□□□ -1.12
CD44-232ENST00000531118 CYP2A6P11509 494 aaPredicted RBP8.07□□□□□ -1.12
CD44-232ENST00000531118 KRT9P35527 623 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 TSFMP43897 325 aaKnown RBP8.07□□□□□ -1.12
CD44-232ENST00000531118 APBA1Q02410 837 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 ACY1Q03154 408 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 SMTNL2Q2TAL5 461 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 VWA2Q5GFL6 755 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 ZNF658Q5TYW1 1059 aaPredicted RBP8.07□□□□□ -1.12
CD44-232ENST00000531118 LCN10Q6JVE6 187 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 IRGCQ6NXR0 463 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 TRIM65Q6PJ69 517 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 CERS6Q6ZMG9 384 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 RFLNAQ6ZTI6 216 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 TECPR1Q7Z6L1 1165 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 TSPAN33Q86UF1 283 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 TMEM126BQ8IUX1 230 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 PHYKPLQ8IUZ5 450 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 TRIM48Q8IWZ4 208 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 UMODL1-AS1Q8N2C9 162 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 PYROXD2Q8N2H3 581 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 GALNT16Q8N428 558 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 ZADH2Q8N4Q0 377 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 TMEM35BQ8NCS4 154 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 SNX21Q969T3 373 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 RELTQ969Z4 430 aa8.07□□□□□ -1.12
CD44-232ENST00000531118 NTAN1Q96AB6 310 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms