RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CNOT6Q9ULM6 557 aaKnown RBP17.04■□□□□ 0.32
BRCA2-204ENST00000530893 LZTS1Q9Y250 596 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 TIMM22Q9Y584 194 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 PCDHB9Q9Y5E1 797 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 OR51B4Q9Y5P0 310 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 COMMD3-BMI1R4GMX3 469 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 NCF1BA6NI72 391 aaPredicted RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 NCF1CA8MVU1 366 aaPredicted RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 TBL1XO60907 577 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 EEDO75530 441 aaKnown RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 NCF1P14598 390 aaPredicted RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 PSMC3P17980 439 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 GSTT1P30711 240 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 AGTR2P50052 363 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 HK3P52790 923 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 DIO3P55073 304 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 POLE2P56282 527 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 NME5P56597 212 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 TXNL4AP83876 142 aaKnown RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 PCBP2Q15366 365 aaKnown RBP eCLIP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 C6orf52Q5T4I8 152 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 TAS2R42Q7RTR8 314 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 ERMP1Q7Z2K6 904 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 HOMEZQ8IX15 550 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 CARNMT1Q8N4J0 409 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 PACRGLQ8N7B6 248 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 GPR63Q9BZJ6 419 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 PCDHA9Q9Y5H5 950 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 SLC22A3O75751 556 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 MBL2P11226 248 aaPredicted RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 ZNF7P17097 686 aaPredicted RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 RPS3P23396 243 aaKnown RBP eCLIP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 MAPK8P45983 427 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 SMAD3P84022 425 aaKnown RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 ADRM1Q16186 407 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 THEMIS2Q5TEJ8 643 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 FAM219BQ5XKK7 198 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 GRIN3AQ8TCU5 1115 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 DDI1Q8WTU0 396 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 PPWD1Q96BP3 646 aaKnown RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 SLC45A3Q96JT2 553 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 SEMA6AQ9H2E6 1030 aa17.03■□□□□ 0.32
BRCA2-204ENST00000530893 LEF1Q9UJU2 399 aaPredicted RBP17.03■□□□□ 0.32
BRCA2-204ENST00000530893 PLXNA4Q9HCM2 1894 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 GFRA2O00451 464 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 PGLSO95336 258 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 ATP6V1B2P21281 511 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 IL10P22301 178 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 PSMA4P25789 261 aaKnown RBP17.02■□□□□ 0.32
BRCA2-204ENST00000530893 MZF1P28698 734 aaPredicted RBP17.02■□□□□ 0.32
BRCA2-204ENST00000530893 PRDX3P30048 256 aaKnown RBP17.02■□□□□ 0.32
BRCA2-204ENST00000530893 PRMT2P55345 433 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 MYBPC1Q00872 1141 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 ECT2LQ008S8 904 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 MTX3Q5HYI7 312 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 PPP4R4Q6NUP7 873 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 PRR23BQ6ZRT6 265 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 PTRH1Q86Y79 214 aaKnown RBP17.02■□□□□ 0.32
BRCA2-204ENST00000530893 CHERPQ8IWX8 916 aaKnown RBP17.02■□□□□ 0.32
BRCA2-204ENST00000530893 CANT1Q8WVQ1 401 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 WBP2Q969T9 261 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 MYO19Q96H55 970 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 LRCH3Q96II8 777 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 TRIM4Q9C037 500 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 C8orf4Q9NR00 106 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 CMTM6Q9NX76 183 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 SUN2Q9UH99 717 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 VPS51Q9UID3 782 aa17.02■□□□□ 0.32
BRCA2-204ENST00000530893 SCN5AQ14524 2016 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 MICAL3Q7RTP6 2002 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 KANSL1LA0AUZ9 987 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 DHRS12A0PJE2 317 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 ZNF839A8K0R7 811 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 CSPG5O95196 566 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 GPIP06744 558 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 CDH18Q13634 790 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 NFYCQ13952 458 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 ARHGEF6Q15052 776 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 ATP6AP1LQ52LC2 224 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 INTS11Q5TA45 600 aaKnown RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 LYPLAL1Q5VWZ2 237 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 CWF19L1Q69YN2 538 aaKnown RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 RETSATQ6NUM9 610 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 FRA10AC1Q70Z53 315 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 TMEM199Q8N511 208 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 ALG14Q96F25 216 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 SCLYQ96I15 445 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 C2orf49Q9BVC5 232 aaPredicted RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 NOL11Q9H8H0 719 aaKnown RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 IL1RL2Q9HB29 575 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 VCX3AQ9NNX9 186 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 EIF2B4Q9UI10 523 aaKnown RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 FAM234BA2RU67 622 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 C7orf72A4D263 438 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 CCDC154A6NI56 674 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 S100BP04271 92 aaPredicted RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 TFAP2AP05549 437 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms