RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 MIDNQ504T8 468 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 SPDYCQ5MJ68 293 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 MPP7Q5T2T1 576 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 SIGIRRQ6IA17 410 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 PLEKHA7Q6IQ23 1121 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 MIS18BP1Q6P0N0 1132 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 MSANTD1Q6ZTZ1 278 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 LRRC49Q8IUZ0 686 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 DDIASQ8IXT1 998 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 SIX6OS1Q8N1H7 587 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 DRAXINQ8NBI3 349 aaPredicted RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 SPC24Q8NBT2 197 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 RBM15BQ8NDT2 890 aaKnown RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 ZNF548Q8NEK5 533 aaPredicted RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 MOSPD2Q8NHP6 518 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 CFAP61Q8NHU2 1237 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 BRSK1Q8TDC3 778 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 TRPC4APQ8TEL6 797 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 GRK7Q8WTQ7 553 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 ZBTB9Q96C00 473 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 LINC00615Q96LM1 132 aaPredicted RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 TSGA13Q96PP4 275 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 ACOX2Q99424 681 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 MGME1Q9BQP7 344 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 SYT17Q9BSW7 474 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 TCHPQ9BT92 498 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 POLDIP3Q9BY77 421 aaKnown RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 SPATC1LQ9H0A9 340 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 SLCO5A1Q9H2Y9 848 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 MMADHCQ9H3L0 296 aaPredicted RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 KCNK15Q9H427 330 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 DNAJC18Q9H819 358 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 TRPV4Q9HBA0 871 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 PNRC2Q9NPJ4 139 aaKnown RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 TCF7L2Q9NQB0 619 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 PIH1D3Q9NQM4 214 aaKnown RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 ZNHIT6Q9NWK9 470 aaKnown RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 DDX43Q9NXZ2 648 aaKnown RBP3.29□□□□□ -1.88
CD44-229ENST00000528672 TBC1D7Q9P0N9 293 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 DNAJB4Q9UDY4 337 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 KLHL20Q9Y2M5 609 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 C2CD2Q9Y426 696 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 NFE2L3Q9Y4A8 694 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 CLIC4Q9Y696 253 aa3.29□□□□□ -1.88
CD44-229ENST00000528672 CPED1A4D0V7 1026 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 OR6C76A6NM76 312 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 H0YHG0 523 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 H0YIN7 160 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 M0QX08 132 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 VCYO14598 125 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 KLHL41O60662 606 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 KINO60870 393 aaKnown RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 GH2P01242 217 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 CELA2AP08217 269 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 MYZAPP0CAP1 466 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 THEGLP0DJG4 465 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 VPREB1P12018 145 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 PFKFB1P16118 471 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 CD9P21926 228 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 TNFSF8P32971 234 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 ALDH3A2P51648 485 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 TPD52P55327 224 aaPredicted RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 SIRPAP78324 504 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 CTAG1AP78358 180 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 SARNPP82979 210 aaKnown RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 LRRC74AQ0VAA2 488 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 TRDNQ13061 729 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 PTK6Q13882 451 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 ZNF273Q14593 569 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 EZH2Q15910 746 aaKnown RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 NHSL2Q5HYW2 709 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 MEX3CQ5U5Q3 659 aaKnown RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 ZNF626Q68DY1 528 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 KRT39Q6A163 491 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 ZNF813Q6ZN06 617 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 PQLC2Q6ZP29 291 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 FAM57BQ71RH2 274 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 DPPA4Q7L190 304 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 HAUS6Q7Z4H7 955 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 SDCCAG8Q86SQ7 713 aaPredicted RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 LDB1Q86U70 411 aaPredicted RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 MFN1Q8IWA4 741 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 FAM217AQ8IXS0 508 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 RBFAQ8N0V3 343 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 C10orf53Q8N6V4 93 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 NAT8LQ8N9F0 302 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 FAM184AQ8NB25 1140 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 SCCPDHQ8NBX0 429 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 OR10S1Q8NGN2 331 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 BICD2Q8TD16 824 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 ARSGQ96EG1 525 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 RBM18Q96H35 190 aaKnown RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 EGLN2Q96KS0 407 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 C1QTNF7Q9BXJ2 289 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 FUT8Q9BYC5 575 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 PIGMQ9H3S5 423 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 CNOT10Q9H9A5 744 aaKnown RBP3.28□□□□□ -1.88
CD44-229ENST00000528672 EPB41L5Q9HCM4 733 aa3.28□□□□□ -1.88
CD44-229ENST00000528672 CHMP1AQ9HD42 196 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms