RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 PLA2G4EQ3MJ16 856 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 HIST2H2BCQ6DN03 193 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 ALG1LQ6GMV1 187 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 SYVN1Q86TM6 617 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 TMEM135Q86UB9 458 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 HPS6Q86YV9 775 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 KLHL6Q8WZ60 621 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 ZNF830Q96NB3 372 aaPredicted RBP11.37□□□□□ -0.59
CMTM1-211ENST00000528484 SMIM14Q96QK8 99 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 TIMM29Q9BSF4 260 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 HAUS4Q9H6D7 363 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 ZFYVE1Q9HBF4 777 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 PCDH18Q9HCL0 1135 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 CASS4Q9NQ75 786 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 OGFRQ9NZT2 677 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 DNAJC16Q9Y2G8 782 aa11.37□□□□□ -0.59
CMTM1-211ENST00000528484 PCYT1BQ9Y5K3 369 aaPredicted RBP11.37□□□□□ -0.59
CMTM1-211ENST00000528484 ARGFXA6NJG6 315 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 VEGFDO43915 354 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 CPNE3O75131 537 aaKnown RBP11.36□□□□□ -0.59
CMTM1-211ENST00000528484 SLC4A1P02730 911 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 ZNF7P17097 686 aaPredicted RBP11.36□□□□□ -0.59
CMTM1-211ENST00000528484 CCNCP24863 283 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 SLC19A1P41440 591 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 CCL11P51671 97 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 KLHL30Q0D2K2 578 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 GALNT2Q10471 571 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 PLCL1Q15111 1095 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 FILIP1LQ4L180 1135 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 ALS2CLQ60I27 953 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 MAP7D3Q8IWC1 876 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 MAML1Q92585 1016 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 RSC1A1Q92681 617 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 FATE1Q969F0 183 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 GLYATL1Q969I3 302 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 TTC25Q96NG3 672 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 RAB33BQ9H082 229 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 ING2Q9H160 280 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 ARFGAP3Q9NP61 516 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 CHMP5Q9NZZ3 219 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 EPHA6Q9UF33 1036 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 IP6K2Q9UHH9 426 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 SLC30A1Q9Y6M5 507 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 ITPR2Q14571 2701 aa11.36□□□□□ -0.59
CMTM1-211ENST00000528484 UBA6A0AVT1 1052 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 LRRC10BA6NIK2 292 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 LRRC53A6NM62 1247 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 MFSD11O43934 449 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 CDK14O94921 469 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 KLK3P07288 261 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 RPL10P27635 214 aaKnown RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 CD86P42081 329 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 TNNT3P45378 269 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 DCDC1P59894 354 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 GPR18Q14330 331 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 STX1AQ16623 288 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 QPCTQ16769 361 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 NADK2Q4G0N4 442 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 TMTC4Q5T4D3 741 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 ZFYVE27Q5T4F4 411 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 AGAP9Q5VTM2 703 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 ABRAXAS1Q6UWZ7 409 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 WASH2PQ6VEQ5 465 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 MAMDC2Q7Z304 686 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 KMT5CQ86Y97 462 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 TRAPPC5Q8IUR0 188 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 TMEM126BQ8IUX1 230 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 TRAM1L1Q8N609 369 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 CCNYQ8ND76 341 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 GDAP1Q8TB36 358 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 ZNF514Q96K75 400 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 WDR24Q96S15 920 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 SRPK1Q96SB4 655 aaKnown RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 SYT11Q9BT88 431 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 TRIM55Q9BYV6 548 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 GPR63Q9BZJ6 419 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 ZCCHC2Q9C0B9 1178 aaKnown RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 FANCEQ9HB96 536 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 SLC40A1Q9NP59 571 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 WASH6PQ9NQA3 447 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 SCHIP1Q9P0W5 487 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 ZNF624Q9P2J8 865 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 ANAPC7Q9UJX3 599 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 FARSAQ9Y285 508 aaKnown RBP11.35□□□□□ -0.59
CMTM1-211ENST00000528484 MAP4K5Q9Y4K4 846 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 CELSR2Q9HCU4 2923 aa11.35□□□□□ -0.59
CMTM1-211ENST00000528484 CACNA1DQ01668 2161 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 OR52A4PA6NMU1 304 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 MYO1FO00160 1098 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 CHUKO15111 745 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 KIF1CO43896 1103 aaKnown RBP11.34□□□□□ -0.59
CMTM1-211ENST00000528484 KCNJ13O60928 360 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 PDGFAP04085 211 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 HLA-DQB2P05538 268 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 GSDMDP57764 484 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 CHAF1BQ13112 559 aa11.34□□□□□ -0.59
CMTM1-211ENST00000528484 PAFAH1B3Q15102 231 aaKnown RBP11.34□□□□□ -0.59
CMTM1-211ENST00000528484 INPP5JQ15735 1006 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms