RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PGAM4Q8N0Y7 254 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 SLC25A23Q9BV35 468 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 MRPL1Q9BYD6 325 aaKnown RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 FAM126AQ9BYI3 521 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 LINC00597Q9H2U6 94 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 BRD9Q9H8M2 597 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 PIDD1Q9HB75 910 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 CD274Q9NZQ7 290 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 CDH22Q9UJ99 828 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 FNDC3AQ9Y2H6 1198 aaKnown RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 NUP210Q8TEM1 1887 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 DOCK6Q96HP0 2047 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 TSPAN11A1L157 253 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 NPEPPSL1A6NEC2 478 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 NPIPB15A6NHN6 443 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 TMEM233B4DJY2 109 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 PSMD12O00232 456 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 KPNA5O15131 536 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 SLC25A14O95258 325 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 ESRRBO95718 433 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 ADH1CP00326 375 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 JUNP05412 331 aaKnown RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 ENO3P13929 434 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 EN2P19622 333 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 GKP32189 559 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 IRS1P35568 1242 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 MRPL19P49406 292 aaKnown RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 MTTPP55157 894 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 CDH13P55290 713 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 C1QTNF8P60827 252 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 PTSQ03393 145 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 ARHGEF7Q14155 803 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 PTPRRQ15256 657 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 TGFBIQ15582 683 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 GSTA3Q16772 222 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 GEN1Q17RS7 908 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 RIPOR1Q6ZS17 1223 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 SPATA19Q7Z5L4 167 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 ADGRG6Q86SQ4 1221 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 MYLK4Q86YV6 388 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 GIMAP7Q8NHV1 300 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 TRPC4APQ8TEL6 797 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 TSPEARQ8WU66 669 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 WDR60Q8WVS4 1066 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 PBXIP1Q96AQ6 731 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 TIFAQ96CG3 184 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 PPP1R36Q96LQ0 422 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 COPS8Q99627 209 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 SLC30A3Q99726 388 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 HGH1Q9BTY7 390 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 LMAN2LQ9H0V9 348 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 ZDHHC6Q9H6R6 413 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 RDH14Q9HBH5 336 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 KCTD5Q9NXV2 234 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 NFKBIL1Q9UBC1 381 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 GALPQ9UBC7 116 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 DKK3Q9UBP4 350 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 NKX1-2Q9UD57 310 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 SLCO3A1Q9UIG8 710 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 SLC27A6Q9Y2P4 619 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 C15orf41Q9Y2V0 281 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 DNAJC15Q9Y5T4 150 aa14.6□□□□□ -0.07
ECHDC1-220ENST00000528402 AIM2O14862 343 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 HOXC11O43248 304 aaPredicted RBP14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 SIX3O95343 332 aaPredicted RBP14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 OR56A5P0C7T3 313 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 LBPP18428 481 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 DCDC1P59894 354 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 ERVK-21P61565 698 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 GPM6BQ13491 265 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 PTK2BQ14289 1009 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 DHCR24Q15392 516 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 GPRC6AQ5T6X5 926 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 TMEM198Q66K66 360 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 LRRC66Q68CR7 880 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 HACD2Q6Y1H2 254 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 ZSWIM9Q86XI8 627 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 DSELQ8IZU8 1212 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 ZBTB2Q8N680 514 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 PDPRQ8NCN5 879 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 PPFIBP2Q8ND30 876 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 OR2A12Q8NGT7 310 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 OSCP1Q8WVF1 389 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 TWIST2Q8WVJ9 160 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 VOPP1Q96AW1 172 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 FAM136AQ96C01 138 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 ZNF707Q96C28 371 aaPredicted RBP14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 ZNF382Q96SR6 550 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 SARS2Q9NP81 518 aaKnown RBP14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 DUS2Q9NX74 493 aaKnown RBP14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 OBP2AQ9NY56 170 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 PCTPQ9UKL6 214 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 FIS1Q9Y3D6 152 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 OARD1Q9Y530 152 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 LRRC42Q9Y546 428 aa14.59□□□□□ -0.07
ECHDC1-220ENST00000528402 IGLV3-16A0A075B6K0 115 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 BBIP1A8MTZ0 92 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 MEI4A8MW99 385 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 QSOX1O00391 747 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 UGT2B4P06133 528 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms