RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 ZNF7P17097 686 aaPredicted RBP10.5□□□□□ -0.73
CD44-227ENST00000528086 TPH1P17752 444 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 PSMA3P25788 255 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 ACTN2P35609 894 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 GRIA1P42261 906 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 GPR3P46089 330 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 GSDMDP57764 484 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 ERVPABLB-1P60509 514 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 TMEM115Q12893 351 aaPredicted RBP10.5□□□□□ -0.73
CD44-227ENST00000528086 CLCA4Q14CN2 919 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 TAF1AQ15573 450 aaPredicted RBP10.5□□□□□ -0.73
CD44-227ENST00000528086 AMZ1Q400G9 498 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 ZNF658BQ4V348 819 aaPredicted RBP10.5□□□□□ -0.73
CD44-227ENST00000528086 GPRC6AQ5T6X5 926 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 CCDC181Q5TID7 509 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 RAB11FIP2Q7L804 512 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 GLT6D1Q7Z4J2 308 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 SYCE1Q8N0S2 351 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 TAB3Q8N5C8 712 aaPredicted RBP10.5□□□□□ -0.73
CD44-227ENST00000528086 RCBTB1Q8NDN9 531 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 DDHD1Q8NEL9 900 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 WDR36Q8NI36 951 aaKnown RBP10.5□□□□□ -0.73
CD44-227ENST00000528086 TBC1D10AQ9BXI6 508 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 EPB41L5Q9HCM4 733 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 KLC4Q9NSK0 619 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 HACD3Q9P035 362 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 FOXJ2Q9P0K8 574 aa10.5□□□□□ -0.73
CD44-227ENST00000528086 KALRNO60229 2985 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 GLYATL1P3A0A0U1RQE8 302 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 RHPN2P1A8MT19 583 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 PLD2O14939 933 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 VEGFDO43915 354 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 SNX2O60749 519 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 ANXA9O76027 345 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 CDK14O94921 469 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 CPNE6O95741 557 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 THRAP10827 490 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 FGF3P11487 239 aaPredicted RBP10.49□□□□□ -0.73
CD44-227ENST00000528086 SLC5A2P31639 672 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 SPAM1P38567 509 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 LIMK2P53671 638 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 CLN3Q13286 438 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 TGIF1Q15583 401 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 PARP6Q2NL67 630 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 SOWAHCQ53LP3 525 aaPredicted RBP10.49□□□□□ -0.73
CD44-227ENST00000528086 ITPRIPL1Q6GPH6 555 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 CCDC70Q6NSX1 233 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 FOXR1Q6PIV2 292 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 ABRAXAS1Q6UWZ7 409 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 PHYKPLQ8IUZ5 450 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 FBXO39Q8N4B4 442 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 LILRA3Q8N6C8 439 aaPredicted RBP10.49□□□□□ -0.73
CD44-227ENST00000528086 UBL4BQ8N7F7 174 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 BEND7Q8N7W2 519 aaPredicted RBP10.49□□□□□ -0.73
CD44-227ENST00000528086 BMPERQ8N8U9 685 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 ZNF398Q8TD17 642 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 BRSK1Q8TDC3 778 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 CCDC74BQ96LY2 380 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 SRPK1Q96SB4 655 aaKnown RBP10.49□□□□□ -0.73
CD44-227ENST00000528086 TBL1YQ9BQ87 522 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 TIMM29Q9BSF4 260 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 FAM96AQ9H5X1 160 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 SARS2Q9NP81 518 aaKnown RBP10.49□□□□□ -0.73
CD44-227ENST00000528086 LZTFL1Q9NQ48 299 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 RAD18Q9NS91 495 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 SMOXQ9NWM0 555 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 CPNE7Q9UBL6 633 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 DNAJC16Q9Y2G8 782 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 LOXL2Q9Y4K0 774 aa10.49□□□□□ -0.73
CD44-227ENST00000528086 TRBV5-4A0A0C4DH59 114 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 OR52A4PA6NMU1 304 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 GPR89AB7ZAQ6 455 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 KMOO15229 486 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 STX7O15400 261 aaKnown RBP10.48□□□□□ -0.73
CD44-227ENST00000528086 PRAMEF1O95521 474 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 ITGA2BP08514 1039 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 ZSCAN5DPP0CG00 497 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 GPR89BP0CG08 455 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 WT1P19544 449 aaPredicted RBP10.48□□□□□ -0.73
CD44-227ENST00000528086 LPOP22079 712 aaPredicted RBP10.48□□□□□ -0.73
CD44-227ENST00000528086 RPL10P27635 214 aaKnown RBP10.48□□□□□ -0.73
CD44-227ENST00000528086 DRG2P55039 364 aaKnown RBP10.48□□□□□ -0.73
CD44-227ENST00000528086 TMPRSS15P98073 1019 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 HHEXQ03014 270 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 NFATC2Q13469 925 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 NFE2L1Q14494 772 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 WASH2PQ6VEQ5 465 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 ARHGAP22Q7Z5H3 698 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 PIM3Q86V86 326 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 LRRTM4Q86VH4 590 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 PIANPQ8IYJ0 282 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 LSMEM2Q8N112 164 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 TTC13Q8NBP0 860 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 GPR150Q8NGU9 434 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 SGF29Q96ES7 293 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 DNAJC1Q96KC8 554 aaKnown RBP10.48□□□□□ -0.73
CD44-227ENST00000528086 TMEM74Q96NL1 305 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 NRTNQ99748 197 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 ANP32EQ9BTT0 268 aa10.48□□□□□ -0.73
CD44-227ENST00000528086 FSD1LQ9BXM9 530 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms