RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 TDRKHQ9Y2W6 561 aaKnown RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 ZNF711Q9Y462 761 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 INSL6Q9Y581 213 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 KIAA0100Q14667 2235 aaKnown RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 OBSL1O75147 1896 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 CCDC162PA2VCL2 907 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 SDHDO14521 159 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 GREM1O60565 184 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 LTA4HP09960 611 aaKnown RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 HSPA8P11142 646 aaKnown RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 ZNF12P17014 697 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 OGNP20774 298 aaKnown RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 VARSP26640 1264 aaKnown RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 HTRA4P83105 476 aaPredicted RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 ZXDBP98169 803 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 SQLEQ14534 574 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 TAF1AQ15573 450 aaPredicted RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 ZNF829Q3KNS6 432 aaPredicted RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 GK5Q6ZS86 529 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 LPCAT1Q8NF37 534 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 PPWD1Q96BP3 646 aaKnown RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 SGF29Q96ES7 293 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 FAR2Q96K12 515 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 NLE1Q9NVX2 485 aaPredicted RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 CD300AQ9UGN4 299 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 EBF1Q9UH73 591 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 CNOT6Q9ULM6 557 aaKnown RBP18.64■□□□□ 0.57
VPS51-204ENST00000527646 PCDHGC4Q9Y5F7 938 aa18.64■□□□□ 0.57
VPS51-204ENST00000527646 TRAV19A0A0A6YYK7 116 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 SUPT3HO75486 399 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 FGBP02675 491 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 NELFEP18615 380 aaKnown RBP18.63■□□□□ 0.57
VPS51-204ENST00000527646 RHOAP61586 193 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 SLC7A9P82251 487 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 HMBOX1Q6NT76 420 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 TTC33Q6PID6 262 aaPredicted RBP18.63■□□□□ 0.57
VPS51-204ENST00000527646 FAM217AQ8IXS0 508 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 DCAF4L2Q8NA75 395 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 BHMTQ93088 406 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 CDKN2AIPNLQ96HQ2 116 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 TCF12Q99081 682 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 C2orf49Q9BVC5 232 aaPredicted RBP18.63■□□□□ 0.57
VPS51-204ENST00000527646 TMEM106CQ9BVX2 250 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 EMILIN2Q9BXX0 1053 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 NCKIPSDQ9NZQ3 722 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 CRYL1Q9Y2S2 319 aa18.63■□□□□ 0.57
VPS51-204ENST00000527646 TRIM64A6NGJ6 449 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 RBP1P09455 135 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 MYF6P23409 242 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 CSKP41240 450 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 ZNF140P52738 457 aaPredicted RBP18.62■□□□□ 0.57
VPS51-204ENST00000527646 PPIGQ13427 754 aaKnown RBP eCLIP18.62■□□□□ 0.579e-6■■□□□ 12.8
VPS51-204ENST00000527646 PTPRCAPQ14761 206 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 INTS11Q5TA45 600 aaKnown RBP18.62■□□□□ 0.57
VPS51-204ENST00000527646 REP15Q6BDI9 236 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 LILRA6Q6PI73 481 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 PIWIL4Q7Z3Z4 852 aaKnown RBP18.62■□□□□ 0.57
VPS51-204ENST00000527646 TMC8Q8IU68 726 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 CAMK1DQ8IU85 385 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 HS6ST3Q8IZP7 471 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 AFAP1L2Q8N4X5 818 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 KREMEN2Q8NCW0 462 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 CLP1Q92989 425 aaKnown RBP18.62■□□□□ 0.57
VPS51-204ENST00000527646 CCDC126Q96EE4 140 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 THAP11Q96EK4 314 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 IGSF5Q9NSI5 407 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 CFAP97Q9P2B7 532 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 PCDH10Q9P2E7 1040 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 PRKAG2Q9UGJ0 569 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 VPS51Q9UID3 782 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 PTPRSQ13332 1948 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 PRORSD1PA6NEY8 169 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 ANKRD66B4E2M5 251 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 PSMD12O00232 456 aaPredicted RBP18.62■□□□□ 0.57
VPS51-204ENST00000527646 GFRA2O00451 464 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 CD160O95971 181 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 PRLP01236 227 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 SLC26A3P40879 764 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 CDH15P55291 814 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 NME5P56597 212 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 NAA20P61599 178 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 RETSATQ6NUM9 610 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 AFTPHQ6ULP2 937 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 HACD2Q6Y1H2 254 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 HTR3DQ70Z44 454 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 TXNDC5Q8NBS9 432 aaKnown RBP18.62■□□□□ 0.57
VPS51-204ENST00000527646 NSMCE3Q96MG7 304 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 DOK1Q99704 481 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 ASAH2Q9NR71 780 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 SPO11Q9Y5K1 396 aa18.62■□□□□ 0.57
VPS51-204ENST00000527646 A0A1W2PRU2 124 aa18.61■□□□□ 0.57
VPS51-204ENST00000527646 AKAP10O43572 662 aa18.61■□□□□ 0.57
VPS51-204ENST00000527646 ATP5F1P24539 256 aaPredicted RBP18.61■□□□□ 0.57
VPS51-204ENST00000527646 STC1P52823 247 aa18.61■□□□□ 0.57
VPS51-204ENST00000527646 PRKCQQ04759 706 aa18.61■□□□□ 0.57
VPS51-204ENST00000527646 ACAP2Q15057 778 aa18.61■□□□□ 0.57
VPS51-204ENST00000527646 MPPE1Q53F39 396 aa18.61■□□□□ 0.57
VPS51-204ENST00000527646 NCEH1Q6PIU2 408 aa18.61■□□□□ 0.57
VPS51-204ENST00000527646 ERMP1Q7Z2K6 904 aa18.61■□□□□ 0.57
VPS51-204ENST00000527646 DHFR2Q86XF0 187 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms