RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 MC4RP32245 332 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 PTGIRP43119 386 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 CTSCP53634 463 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 B4GALNT1Q00973 533 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 TSTD2Q5T7W7 516 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 MICALCLQ6ZW33 695 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 ZNF438Q7Z4V0 828 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 ARL14Q8N4G2 192 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 DCBLD1Q8N8Z6 715 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 ULK4Q96C45 1275 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 SGSM3Q96HU1 749 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 CAPZA3Q96KX2 299 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 CCDC3Q9BQI4 270 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 TMEM121BQ9BXQ6 578 aaPredicted RBP19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 ZCCHC2Q9C0B9 1178 aaKnown RBP19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 IL22Q9GZX6 179 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 DDX47Q9H0S4 455 aaKnown RBP19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 KCNK6Q9Y257 313 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 TCAF1Q9Y4C2 921 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 DNMT3AQ9Y6K1 912 aaPredicted RBP19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 RNF215Q9Y6U7 377 aa19.49■□□□□ 0.71
EXOSC4-202ENST00000525936 NTN3O00634 580 aaPredicted RBP19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 VPS41P49754 854 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 CDKN1CP49918 316 aaPredicted RBP19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 CLDN6P56747 220 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 CAMK2BQ13554 666 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 NR1D2Q14995 579 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 PCID2Q5JVF3 399 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 HES3Q5TGS1 186 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 ANKRD22Q5VYY1 191 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 IYDQ6PHW0 289 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 CRTC3Q6UUV7 619 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 CAND1Q86VP6 1230 aaKnown RBP19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 PIANPQ8IYJ0 282 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 SFRP1Q8N474 314 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 MCUQ8NE86 351 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 MAPK15Q8TD08 544 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 PATE1Q8WXA2 126 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 CCDC74AQ96AQ1 378 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 ZNF514Q96K75 400 aaPredicted RBP19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 TTC25Q96NG3 672 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 FAM96AQ9H5X1 160 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 CHRAC1Q9NRG0 131 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 KLC4Q9NSK0 619 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 LRIT1Q9P2V4 623 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 SLC2A6Q9UGQ3 507 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 SLC30A1Q9Y6M5 507 aa19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 TPRP12270 2363 aaKnown RBP19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 COL27A1Q8IZC6 1860 aaPredicted RBP19.48■□□□□ 0.71
EXOSC4-202ENST00000525936 CCDC162PA2VCL2 907 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 CASC3O15234 703 aaKnown RBP19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 KCNJ13O60928 360 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 TMEM63AO94886 807 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 MLNP12872 115 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 FASLGP48023 281 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 MAZP56270 477 aaKnown RBP19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 SESN2P58004 480 aaPredicted RBP19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 CACNG1Q06432 222 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 DMPKQ09013 629 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 GTF2H3Q13889 308 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 ARMC3Q5W041 872 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 TMEM220Q6QAJ8 160 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 MARCH9Q86YJ5 346 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 HEXDCQ8WVB3 486 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 GATA6Q92908 595 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 HDAC10Q969S8 669 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 SGF29Q96ES7 293 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 CCDC97Q96F63 343 aaPredicted RBP19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 KIFC1Q9BW19 673 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 TREX1Q9NSU2 369 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 ZDHHC3Q9NYG2 299 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 BFARQ9NZS9 450 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 CRLS1Q9UJA2 301 aa19.47■□□□□ 0.71
EXOSC4-202ENST00000525936 CCDC78A2IDD5 438 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 FAM149AA5PLN7 773 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 POP7O75817 140 aaKnown RBP19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 MT-CO3P00414 261 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 PRSS56P0CW18 603 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 F3P13726 295 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 MSH3P20585 1137 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 ACRV1P26436 265 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 IVDP26440 423 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 FOXN2P32314 431 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 PTK6Q13882 451 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 BCL7AQ4VC05 210 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 WASH2PQ6VEQ5 465 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 SERPINA9Q86WD7 417 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 TRAPPC5Q8IUR0 188 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 NAT8LQ8N9F0 302 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 WDR48Q8TAF3 677 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 LINC00615Q96LM1 132 aaPredicted RBP19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 COPS8Q99627 209 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 ABCG4Q9H172 646 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 MRM3Q9HC36 420 aaKnown RBP19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 WASH6PQ9NQA3 447 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 PRDM8Q9NQV8 689 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 CLCA2Q9UQC9 943 aa19.46■□□□□ 0.71
EXOSC4-202ENST00000525936 A0A1W2PQM1 296 aa19.45■□□□□ 0.7
EXOSC4-202ENST00000525936 OR51F1A6NGY5 319 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms