RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ACBD6Q9BR61 282 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 CIPCQ9C0C6 399 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 CCSER1Q9C0I3 900 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 TINAGL1Q9GZM7 467 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-203ENST00000524927 CHMP4BQ9H444 224 aaKnown RBP7.05□□□□□ -1.28
NEDD8-203ENST00000524927 SMURF2Q9HAU4 748 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 GPRC5BQ9NZH0 403 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 SERGEFQ9UGK8 458 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 DDX19BQ9UMR2 479 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 AGAP1Q9UPQ3 857 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 CEP83Q9Y592 693 aa7.05□□□□□ -1.28
NEDD8-203ENST00000524927 TDRD6O60522 2096 aaKnown RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 ANK2Q01484 3957 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 TARSL2A2RTX5 802 aaKnown RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 K7ERI5 159 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PIRO00625 290 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 CYB561D2O14569 222 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 GPR42O15529 346 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 COCHO43405 550 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 KCNAB3O43448 404 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 RAD1O60671 282 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 USO1O60763 962 aaKnown RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 RNASEH2AO75792 299 aaKnown RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 DNAJB5O75953 348 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 SLITRK3O94933 977 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PRSS23O95084 383 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 TDP2O95551 362 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PENKP01210 267 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 ITGB3P05106 788 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 HEXAP06865 529 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 XRCC6P12956 609 aaKnown RBP eCLIP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 TSHRP16473 764 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PROZP22891 400 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 UCP3P55916 312 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 NLRP5P59047 1200 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 NOP14P78316 857 aaKnown RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 TLE4Q04727 773 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 DCAF17Q5H9S7 520 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PAPD7Q5XG87 772 aaKnown RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 WSCD1Q658N2 575 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 MOXD1Q6UVY6 613 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PIK3AP1Q6ZUJ8 805 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 SPATA2LQ8IUW3 424 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 APLFQ8IW19 511 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 ATP11CQ8NB49 1132 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 ZNF548Q8NEK5 533 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 FAM46DQ8NEK8 389 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 SORCS1Q8WY21 1168 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 MAML1Q92585 1016 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PNPLA2Q96AD5 504 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 SNRNP40Q96DI7 357 aaKnown RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 C19orf60Q96EN9 201 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PKMYT1Q99640 499 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 OMDQ99983 421 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 PPCSQ9HAB8 311 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 MLXIPLQ9NP71 852 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 SERHLQ9NQF3 203 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 ASF1BQ9NVP2 202 aa7.04□□□□□ -1.28
NEDD8-203ENST00000524927 AKAP7Q9P0M2 348 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 ORC3Q9UBD5 711 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-203ENST00000524927 A0A1B0GUH1 482 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 A0A1W2PQM1 296 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 TTC26A0AVF1 554 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 KRT86O43790 486 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 AKAP8O43823 692 aaKnown RBP7.03□□□□□ -1.28
NEDD8-203ENST00000524927 RNASEH1O60930 286 aaKnown RBP7.03□□□□□ -1.28
NEDD8-203ENST00000524927 ATP2C2O75185 946 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 KIF20AO95235 890 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 F9P00740 461 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 RPLP0P05388 317 aaKnown RBP7.03□□□□□ -1.28
NEDD8-203ENST00000524927 SLC11A2P49281 568 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 TUBP50607 506 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 ADPRHP54922 357 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 SPAG1Q07617 926 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 TAF10Q12962 218 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 HECTD3Q5T447 861 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 ATP1A1-AS1Q5TC04 95 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 SPATA1Q5VX52 437 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 C9orf57Q5W0N0 161 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 VSTM1Q6UX27 236 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 CLEC9AQ6UXN8 241 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 HPS6Q86YV9 775 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 SLC35F3Q8IY50 421 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 PDPRQ8NCN5 879 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 WBP2Q969T9 261 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 IQCDQ96DY2 449 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 PPP1R13BQ96KQ4 1090 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 SNX22Q96L94 193 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 IL12RB2Q99665 862 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 PYM1Q9BRP8 204 aaKnown RBP7.03□□□□□ -1.28
NEDD8-203ENST00000524927 CNPPD1Q9BV87 410 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 RBM28Q9NW13 759 aaKnown RBP7.03□□□□□ -1.28
NEDD8-203ENST00000524927 PLK2Q9NYY3 685 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 SUN2Q9UH99 717 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 CYTH4Q9UIA0 394 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 CDC23Q9UJX2 597 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 PLA2G4CQ9UP65 541 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 CDYLQ9Y232 598 aa7.03□□□□□ -1.28
NEDD8-203ENST00000524927 TBC1D3DA0A087WVF3 549 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D3IA0A087WXS9 549 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms