RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CTPS1P17812 591 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 ITGAXP20702 1163 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 DGKAP23743 735 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 MARK3P27448 753 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 SERPINA4P29622 427 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 RFC1P35251 1148 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 IL15P40933 162 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 MTHFRP42898 656 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 BTDP43251 543 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 GYG1P46976 350 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 RPS6KA3P51812 740 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 NEK3P51956 506 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 ZNF132P52740 706 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 MRPL12P52815 198 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 VCPP55072 806 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 ZBTB17Q13105 803 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 HNRNPDQ14103 355 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 HLTFQ14527 1009 aaKnown RBP eCLIP1.7□□□□□ -2.14
CD44-212ENST00000524922 MVPQ14764 893 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 ANGPT1Q15389 498 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 EFNB3Q15768 340 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 SMAD1Q15797 465 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 ME3Q16798 604 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 PFKFB4Q16877 469 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 FBXO43Q4G163 708 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 EPC2Q52LR7 807 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 C14orf177Q52M58 125 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 TCEAL5Q5H9L2 206 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 TMEM268Q5VZI3 342 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 IL31Q6EBC2 164 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 NAPEPLDQ6IQ20 393 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 XRRA1Q6P2D8 792 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 C15orf39Q6ZRI6 1047 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 RAB11FIP2Q7L804 512 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 TLK2Q86UE8 772 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 DZIP1Q86YF9 867 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 SYTL1Q8IYJ3 562 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 SAMD3Q8N6K7 520 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 ANKRD44Q8N8A2 993 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 TMEM105Q8N8V8 129 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 FAM133AQ8N9E0 248 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 LMNTD1Q8N9Z9 388 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 IL17RCQ8NAC3 791 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 LNX1Q8TBB1 728 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 OTUD7AQ8TE49 926 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 PPM1EQ8WY54 764 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 CASP10Q92851 521 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 NSUN4Q96CB9 384 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 ZNF689Q96CS4 500 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 ZNF385AQ96PM9 386 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 UHRF2Q96PU4 802 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 NEK1Q96PY6 1258 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 CDK5RAP2Q96SN8 1893 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 MTG1Q9BT17 334 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 PI4K2AQ9BTU6 479 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 IFT27Q9BW83 186 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 FTHL17Q9BXU8 183 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 VCPKMTQ9H867 229 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 PLEKHA2Q9HB19 425 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 GPR108Q9NPR9 543 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 DDX4Q9NQI0 724 aaKnown RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 PRMT8Q9NR22 394 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 SMC4Q9NTJ3 1288 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 ZFP57Q9NU63 452 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 THAP1Q9NVV9 213 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 MIS18AQ9NYP9 233 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 DLGAP2Q9P1A6 1054 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 DUSP12Q9UNI6 340 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 ZNF711Q9Y462 761 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 NEUROG3Q9Y4Z2 214 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 PCDHGA5Q9Y5G8 931 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 TP53BP1Q12888 1972 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 SIP14410 1827 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 COL4A4P53420 1690 aaPredicted RBP1.7□□□□□ -2.14
CD44-212ENST00000524922 PLIN4Q96Q06 1357 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 NBPF19A0A087WUL8 3843 aa1.7□□□□□ -2.14
CD44-212ENST00000524922 ABCB11O95342 1321 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ZMYM6O95789 1325 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 PTPRCP08575 1304 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ADGRA3Q8IWK6 1321 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 NRCAMQ92823 1304 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 USP9YO00507 2555 aaPredicted RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 RALGAPA2Q2PPJ7 1873 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 PLXNA1Q9UIW2 1896 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 CREBBPQ92793 2442 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 CELSR3Q9NYQ7 3312 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 CBY3A6NI87 242 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 P2RY10O00398 339 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ACKR2O00590 384 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 FFAR2O15552 330 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 TBX10O75333 385 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 GAGE7O76087 117 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 KDM4BO94953 1096 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 CLDN14O95500 239 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 METTL18O95568 372 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 PGK1P00558 417 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ITGA2BP08514 1039 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 UQCRFS1P1P0C7P4 283 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 GAGE12FP0CL80 117 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 GAGE12GP0CL81 117 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms