RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 TBC1D29Q9UFV1 150 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 FAM208BQ5VWN6 2430 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 AP3B1O00203 1094 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 TAF4O00268 1085 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 CES2O00748 559 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 CPNE6O95741 557 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 GAS8O95995 478 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 ERVPABLB-1P60509 514 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 GPLD1P80108 840 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 ZFP36L1Q07352 338 aaKnown RBP20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 SPARCL1Q14515 664 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 LONRF2Q1L5Z9 754 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 ABRAXAS1Q6UWZ7 409 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 SNX20Q7Z614 316 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 GDAP1Q8TB36 358 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 MDM1Q8TC05 714 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 SLC37A2Q8TED4 501 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 RANBP9Q96S59 729 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 EPB41L1Q9H4G0 881 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 STN1Q9H668 368 aaKnown RBP20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 UCK1Q9HA47 277 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 NLE1Q9NVX2 485 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 PRKAB1Q9Y478 270 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 PCDHB1Q9Y5F3 818 aa20.59■□□□□ 0.89
TRAPPC9-215ENST00000524162 CCDC187A0A096LP49 1063 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 TRBV5-4A0A0C4DH59 114 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 SRRM3A6NNA2 597 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 PPM1DO15297 605 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 B4GAT1O43505 415 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 BUD23O43709 281 aaKnown RBP20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A9O60656 530 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 XRCC1P18887 633 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A6P19224 532 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A1P22309 533 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A4P22310 534 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A3P35503 534 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A5P35504 534 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 EPHA4P54764 986 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 CDK16Q00536 496 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 BIRC2Q13490 618 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 SNX1Q13596 522 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 INSCQ1MX18 579 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 ARMC3Q5W041 872 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 SLC9B2Q86UD5 537 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 WDR36Q8NI36 951 aaKnown RBP20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 SNIP1Q8TAD8 396 aaKnown RBP20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 PATE1Q8WXA2 126 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 ZNF578Q96N58 590 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 STRADBQ9C0K7 418 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 ASB8Q9H765 288 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A7Q9HAW7 530 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A10Q9HAW8 530 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 UGT1A8Q9HAW9 530 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 ARFGAP3Q9NP61 516 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 RAB6BQ9NRW1 208 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 KLC4Q9NSK0 619 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 FKBPLQ9UIM3 349 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 KCNK6Q9Y257 313 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 AK5Q9Y6K8 562 aa20.58■□□□□ 0.89
TRAPPC9-215ENST00000524162 CFAP47Q6ZTR5 3102 aa20.58■□□□□ 0.88
TRAPPC9-215ENST00000524162 IGLV3-16A0A075B6K0 115 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 E7EVH7 732 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 KIF5CO60282 957 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 ITGALP20701 1170 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 CXCR5P32302 372 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 ITPR1Q14643 2758 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 PTPRCAPQ14761 206 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 CYP1B1Q16678 543 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 SKIDA1Q1XH10 827 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 ZNF648Q5T619 568 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 NLRP9Q7RTR0 991 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 PIM3Q86V86 326 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 TRAPPC5Q8IUR0 188 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 NXPE1Q8N323 547 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 PRELID2Q8N945 189 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 RASGEF1AQ8N9B8 481 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 OR13C4Q8NGS5 318 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 ATXN7L3BQ96GX2 97 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 LINC00615Q96LM1 132 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 CASS4Q9NQ75 786 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 SLC23A2Q9UGH3 650 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 KCTD3Q9Y597 815 aa20.57■□□□□ 0.88
TRAPPC9-215ENST00000524162 PTPRQQ9UMZ3 2332 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 A0A087WV48 116 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 HEATR9A2RTY3 570 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 MTX2O75431 263 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 EML2O95834 649 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 RALBP11234 206 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 IDSP22304 550 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 RPL22P35268 128 aaKnown RBP20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 INHBCP55103 352 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 HHEXQ03014 270 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 TRA2AQ13595 282 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 TBC1D25Q3MII6 688 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 BCL7AQ4VC05 210 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 CRTC3Q6UUV7 619 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 AMZ2Q86W34 360 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 SLITRK4Q8IW52 837 aa20.56■□□□□ 0.88
TRAPPC9-215ENST00000524162 RBM12BQ8IXT5 1001 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms