RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 C15orf59Q2T9L4 293 aaPredicted RBP3.74□□□□□ -1.81
PCM1-220ENST00000523896 TRNP1Q6NT89 227 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 PM20D2Q8IYS1 436 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 RNF113BQ8IZP6 322 aaKnown RBP3.74□□□□□ -1.81
PCM1-220ENST00000523896 EMC1Q8N766 993 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 OR5R1Q8NH85 324 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 LILRB1Q8NHL6 650 aaPredicted RBP3.74□□□□□ -1.81
PCM1-220ENST00000523896 GSDMBQ8TAX9 411 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 HMGCLL1Q8TB92 370 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 DUSP19Q8WTR2 217 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 ABTB1Q969K4 478 aaPredicted RBP3.74□□□□□ -1.81
PCM1-220ENST00000523896 PIGTQ969N2 578 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 BICD1Q96G01 975 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 TMEM19Q96HH6 336 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 SERINC2Q96SA4 455 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 PCYT2Q99447 389 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 PAFAH2Q99487 392 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 GFI1Q99684 422 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 DNAJC18Q9H819 358 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 TMEM30AQ9NV96 361 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 ARHGEF38Q9NXL2 777 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 MARCH4Q9P2E8 410 aaPredicted RBP3.74□□□□□ -1.81
PCM1-220ENST00000523896 MORF4L1Q9UBU8 362 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 VDAC3Q9Y277 283 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 KLHL20Q9Y2M5 609 aa3.74□□□□□ -1.81
PCM1-220ENST00000523896 PTRH2Q9Y3E5 179 aaKnown RBP3.74□□□□□ -1.81
PCM1-220ENST00000523896 MAGEA13PA6NCF6 341 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 ZNF587BE7ETH6 402 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 ADAM20O43506 726 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 PLPP2O43688 288 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 ZNF217O75362 1048 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 PPP1R3DO95685 299 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 TRIM21P19474 475 aaKnown RBP3.73□□□□□ -1.81
PCM1-220ENST00000523896 IL11P20809 199 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 KCNA5P22460 613 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 HRH2P25021 359 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 TNFRSF8P28908 595 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 USP8P40818 1118 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 STAT2P52630 851 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 RRP1P56182 461 aaKnown RBP3.73□□□□□ -1.81
PCM1-220ENST00000523896 BAATQ14032 418 aaPredicted RBP3.73□□□□□ -1.81
PCM1-220ENST00000523896 KEAP1Q14145 624 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 SF3B4Q15427 424 aaKnown RBP eCLIP3.73□□□□□ -1.81
PCM1-220ENST00000523896 DLG2Q15700 870 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 KIF19Q2TAC6 998 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 RAB6CQ53S08 254 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 NADSYN1Q6IA69 706 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 C16orf82Q7Z2V1 217 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 AACSQ86V21 672 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 TMEM219Q86XT9 240 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 DNAAF5Q86Y56 855 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 DCP1BQ8IZD4 617 aaKnown RBP3.73□□□□□ -1.81
PCM1-220ENST00000523896 GCSAMQ8N6F7 178 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 LSMEM1Q8N8F7 131 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 UTP15Q8TED0 518 aaKnown RBP3.73□□□□□ -1.81
PCM1-220ENST00000523896 SLC44A1Q8WWI5 657 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 SEMA3CQ99985 751 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 RTN4RQ9BZR6 473 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 RAB6CQ9H0N0 254 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 RAD21L1Q9H4I0 556 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 EBF2Q9HAK2 575 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.73□□□□□ -1.81
PCM1-220ENST00000523896 NKIRAS2Q9NYR9 191 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 PLAGL1Q9UM63 463 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 PCDHAC2Q9Y5I4 1007 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 ARHGEF11O15085 1522 aa3.73□□□□□ -1.81
PCM1-220ENST00000523896 PDS5AQ29RF7 1337 aaKnown RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 LOC102723996A0A087X1L8 192 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 A0A0G2JPF8 293 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 A8MV72 311 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 HNRNPCL3B7ZW38 293 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 SH2B2O14492 632 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 ADAMDEC1O15204 470 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 TIMM44O43615 452 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 AVILO75366 819 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 RSL1D1O76021 490 aaKnown RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 PAPSS2O95340 614 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 ZBTB11O95625 1053 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 AFPP02771 609 aaKnown RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 ADRB2P07550 413 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 HNRNPCL4P0DMR1 293 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 FGF3P11487 239 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 MYOD1P15172 320 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 ARSEP51690 589 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 CTSCP53634 463 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 SLC20A2Q08357 652 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 GRAPQ13588 217 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 MEP1AQ16819 746 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 GARNL3Q5VVW2 1013 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 C9orf57Q5W0N0 161 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 ZNF324BQ6AW86 544 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 GFRALQ6UXV0 394 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 ZNF704Q6ZNC4 412 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 Q75L30 129 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 KRT74Q7RTS7 529 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 ARMC9Q7Z3E5 817 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 SATL1Q86VE3 508 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 CEP97Q8IW35 865 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 ODF3L1Q8IXM7 274 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms