RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 TMPRSS11EQ9UL52 423 aa12.46□□□□□ -0.41
TOP1MT-217ENST00000523417 SHOC2Q9UQ13 582 aa12.46□□□□□ -0.41
TOP1MT-217ENST00000523417 DNMT3AQ9Y6K1 912 aaPredicted RBP12.46□□□□□ -0.41
TOP1MT-217ENST00000523417 TLN1Q9Y490 2541 aaKnown RBP12.46□□□□□ -0.42
TOP1MT-217ENST00000523417 SETXQ7Z333 2677 aaKnown RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 SDK2Q58EX2 2172 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 A0A0A6YYK5 440 aaPredicted RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 GOLGA6L3A6NEY3 463 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 POLR1CO15160 346 aaPredicted RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 SNX2O60749 519 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 MFAP3LO75121 409 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 PPFIA2O75334 1257 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 DLGAP3O95886 979 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 RECKO95980 971 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 MT-CYBP00156 380 aaPredicted RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 TPM1P09493 284 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 BRAFP15056 766 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 COMTP21964 271 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 IDSP22304 550 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 CD68P34810 354 aaPredicted RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 WASHC5Q12768 1159 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 TMEM115Q12893 351 aaPredicted RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 IL11RAQ14626 422 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 KDELC1Q6UW63 502 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 ATG14Q6ZNE5 492 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 KDELC2Q7Z4H8 507 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 FAM129CQ86XR2 697 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 RFX6Q8HWS3 928 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 TFB1MQ8WVM0 346 aaKnown RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 JPH3Q8WXH2 748 aaPredicted RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 FCRL5Q96RD9 977 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 TBC1D10AQ9BXI6 508 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 IL26Q9NPH9 171 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 POT1Q9NUX5 634 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 HACD3Q9P035 362 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 IL17CQ9P0M4 197 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 SPO11Q9Y5K1 396 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 HEMK1Q9Y5R4 338 aaPredicted RBP12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 ALG6Q9Y672 507 aa12.45□□□□□ -0.42
TOP1MT-217ENST00000523417 A8MU76 341 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 AURKAO14965 403 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 UBXN7O94888 489 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 VIPP01282 170 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 KRT1P04264 644 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 PIRTP0C851 137 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 MC1RQ01726 317 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 DMPKQ09013 629 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 TBX2Q13207 712 aaPredicted RBP12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 SNAP47Q5SQN1 464 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 ZNF648Q5T619 568 aaPredicted RBP12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 CNGA4Q8IV77 575 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 RCOR2Q8IZ40 523 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 TTC30BQ8N4P2 665 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 ESX1Q8N693 406 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 KLHL6Q8WZ60 621 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 KIAA1143Q96AT1 154 aaPredicted RBP12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 ANP32EQ9BTT0 268 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 CEP41Q9BYV8 373 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 ZNF768Q9H5H4 540 aaKnown RBP12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 SPTLC3Q9NUV7 552 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 SLC30A1Q9Y6M5 507 aa12.44□□□□□ -0.42
TOP1MT-217ENST00000523417 TENM4Q6N022 2769 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 LOC101059948A0A1B0GTJ6 334 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 HACD1B0YJ81 288 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 CST8O60676 142 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 PMPCBO75439 489 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 STK17BO94768 372 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 ZRANB2O95218 330 aaKnown RBP eCLIP12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 LCA5LO95447 670 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 VCLP18206 1134 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 CCR10P46092 362 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 WNT3AP56704 352 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 XRCC4Q13426 336 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 PCSK7Q16549 785 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 INSCQ1MX18 579 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 ATP13A5Q4VNC0 1218 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 KHDC1Q4VXA5 237 aaKnown RBP12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 ODF2Q5BJF6 829 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 TFDP3Q5H9I0 405 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 LDLRAP1Q5SW96 308 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 ALS2CLQ60I27 953 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 PRSS42Q7Z5A4 293 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 KATNAL2Q8IYT4 538 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 ZFPM2Q8WW38 1151 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 MRGPRX2Q96LB1 330 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 FCRL4Q96PJ5 515 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 CTRCQ99895 268 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 C19orf43Q9BQ61 176 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 GPN2Q9H9Y4 310 aaPredicted RBP12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 APMAPQ9HDC9 416 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 ARFGAP3Q9NP61 516 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 SAE1Q9UBE0 346 aaPredicted RBP12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 TRHDEQ9UKU6 1024 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 EFR3BQ9Y2G0 817 aa12.43□□□□□ -0.42
TOP1MT-217ENST00000523417 KLHL33A6NCF5 533 aa12.42□□□□□ -0.42
TOP1MT-217ENST00000523417 AKR1B15C9JRZ8 316 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms