RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 VPS28Q9UK41 221 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 GPR34Q9UPC5 381 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 HS3ST2Q9Y278 367 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 CROCCQ5TZA2 2017 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 ANKRD62A6NC57 917 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 EFCAB7A8K855 629 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 RAD1O60671 282 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 ENDOD1O94919 500 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 APOEP02649 317 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 CD19P15391 556 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 BMP7P18075 431 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 CD83Q01151 205 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 PPARDQ03181 441 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 ROM1Q03395 351 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 MRPL49Q13405 166 aaKnown RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 MYBPC3Q14896 1274 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 PRR30Q53SZ7 412 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 LRRC73Q5JTD7 316 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 CERCAMQ5T4B2 595 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 SYPL2Q5VXT5 272 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 DPY19L3Q6ZPD9 716 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 HEATR4Q86WZ0 1026 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 FAM114A1Q8IWE2 563 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 GRAMD1CQ8IYS0 662 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 FSTL5Q8N475 847 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 ATP11CQ8NB49 1132 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 SYT8Q8NBV8 401 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 DENND6BQ8NEG7 585 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 GOLGA5Q8TBA6 731 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 PDCD6IPQ8WUM4 868 aaKnown RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 IRGQQ8WZA9 623 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 TFAP2BQ92481 460 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 ART4Q93070 314 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 TSACCQ96A04 125 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 CENPTQ96BT3 561 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 MBD6Q96DN6 1003 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 PDXPQ96GD0 296 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 AJUBAQ96IF1 538 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 TMX3Q96JJ7 454 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 LCORQ96JN0 433 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 SLC45A3Q96JT2 553 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 BTN2A3PQ96KV6 586 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 LENG8Q96PV6 779 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 C7orf25Q9BPX7 421 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 ZSWIM1Q9BR11 485 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 DNAI2Q9GZS0 605 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 MIS12Q9H081 205 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 MBNL1Q9NR56 388 aaKnown RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 HESX1Q9UBX0 185 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 VPS51Q9UID3 782 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 APPL1Q9UKG1 709 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 ATP8A1Q9Y2Q0 1164 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 CCDC168Q8NDH2 2452 aa6.37□□□□□ -1.39
VPS13B-211ENST00000522802 ARHGEF17Q96PE2 2063 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-211ENST00000522802 IGHV5-10-1A0A0J9YXX1 117 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 LOC101059948A0A1B0GTJ6 334 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 B4DGG1 531 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 M0QYV0 167 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 GPR39O43194 453 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 AP1G1O43747 822 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 ULK1O75385 1050 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 ZNF821O75541 412 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 LDLRP01130 860 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 IGLV3-25P01717 112 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 CYP1A1P04798 512 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 GKP32189 559 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 RECQLP46063 649 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 HK3P52790 923 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 SESN3P58005 492 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 NUCB2P80303 420 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 STK4Q13043 487 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 SGCGQ13326 291 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 TOP3AQ13472 1001 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 CUL4BQ13620 913 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 IRF4Q15306 451 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 ELOCQ15369 112 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 AMZ1Q400G9 498 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 RABGAP1LQ5R372 815 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 TIGD7Q6NT04 549 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 FBXL22Q6P050 247 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 FRMD7Q6ZUT3 714 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 ASB18Q6ZVZ8 466 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 RD3Q7Z3Z2 195 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 KLHL36Q8N4N3 616 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 TEX19Q8NA77 164 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 GPR156Q8NFN8 814 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 OR6K2Q8NGY2 324 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 CPT1CQ8TCG5 803 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 TMEM174Q8WUU8 243 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 SLC35F5Q8WV83 523 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 STARD8Q92502 1023 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 VOPP1Q96AW1 172 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 FAM149B1Q96BN6 582 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 PPP1R16AQ96I34 528 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 CCDC114Q96M63 670 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 RPRD1AQ96P16 312 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 USP28Q96RU2 1077 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 EDEM3Q9BZQ6 932 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 BRINP2Q9C0B6 783 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 LRRC27Q9C0I9 530 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms