RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 NFATC2Q13469 925 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 ITGA9Q13797 1035 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 SPIDRQ14159 915 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 SEPT7Q16181 437 aaKnown RBP17.6■□□□□ 0.41
CLK4-211ENST00000522556 INSCQ1MX18 579 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 ZDHHC20Q5W0Z9 365 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 XKR5Q6UX68 686 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 FAM83HQ6ZRV2 1179 aaPredicted RBP17.6■□□□□ 0.41
CLK4-211ENST00000522556 ZNF534Q76KX8 674 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 ZNF438Q7Z4V0 828 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 SFRP1Q8N474 314 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 DTX3LQ8TDB6 740 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 PBKQ96KB5 322 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 DEPDC7Q96QD5 511 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 RDH14Q9HBH5 336 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 CASS4Q9NQ75 786 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 FEZ2Q9UHY8 353 aaPredicted RBP17.6■□□□□ 0.41
CLK4-211ENST00000522556 APPL1Q9UKG1 709 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 SNX12Q9UMY4 172 aa17.6■□□□□ 0.41
CLK4-211ENST00000522556 MROH6A6NGR9 719 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 E7EVH7 732 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 PSMD3O43242 534 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 MPOP05164 745 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 ALDH4A1P30038 563 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 PBLDP30039 288 aaPredicted RBP17.59■□□□□ 0.41
CLK4-211ENST00000522556 CSF2RBP32927 897 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 LMAN1P49257 510 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 CRADDP78560 199 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 BASP1P80723 227 aaKnown RBP17.59■□□□□ 0.41
CLK4-211ENST00000522556 LDLRAP1Q5SW96 308 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 NKAIN2Q5VXU1 208 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 PPP1R21Q6ZMI0 780 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 RBM44Q6ZP01 1051 aaKnown RBP17.59■□□□□ 0.41
CLK4-211ENST00000522556 GSTA5Q7RTV2 222 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 DNAAF3Q8N9W5 541 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 MAIP1Q8WWC4 291 aa17.59■□□□□ 0.41
CLK4-211ENST00000522556 NLE1Q9NVX2 485 aaPredicted RBP17.59■□□□□ 0.41
CLK4-211ENST00000522556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
CLK4-211ENST00000522556 RHPN2P1A8MT19 583 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 AGAP14A8MT82 685 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 GPR89AB7ZAQ6 455 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 PGRMC1O00264 195 aaKnown RBP17.58■□□□□ 0.4
CLK4-211ENST00000522556 KMOO15229 486 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 GPR89BP0CG08 455 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 F3P13726 295 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 BRAFP15056 766 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 RPL10P27635 214 aaKnown RBP17.58■□□□□ 0.4
CLK4-211ENST00000522556 AKT1P31749 480 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 ACTN2P35609 894 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 DRG2P55039 364 aaKnown RBP17.58■□□□□ 0.4
CLK4-211ENST00000522556 CFHR1Q03591 330 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 CDH17Q12864 832 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 NR1D2Q14995 579 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 CYP1B1Q16678 543 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 AMZ1Q400G9 498 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 C3orf38Q5JPI3 329 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 FNBP1LQ5T0N5 605 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 IYDQ6PHW0 289 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 TMEM220Q6QAJ8 160 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 LINC00523Q86TU6 105 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 PIANPQ8IYJ0 282 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 CACTIN-AS1Q8N1I8 211 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 OR13J1Q8NGT2 312 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 MAGOHBQ96A72 148 aaKnown RBP17.58■□□□□ 0.4
CLK4-211ENST00000522556 SGF29Q96ES7 293 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 GFM1Q96RP9 751 aaKnown RBP17.58■□□□□ 0.4
CLK4-211ENST00000522556 NUDT22Q9BRQ3 303 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 TIMM29Q9BSF4 260 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 CCDC86Q9H6F5 360 aaKnown RBP17.58■□□□□ 0.4
CLK4-211ENST00000522556 FAM8A1Q9UBU6 413 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 CRLS1Q9UJA2 301 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 WDR37Q9Y2I8 494 aa17.58■□□□□ 0.4
CLK4-211ENST00000522556 APC2O95996 2303 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 ERI2A8K979 691 aaKnown RBP17.57■□□□□ 0.4
CLK4-211ENST00000522556 BRINP1O60477 761 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 COILP38432 576 aaPredicted RBP17.57■□□□□ 0.4
CLK4-211ENST00000522556 GTF2H3Q13889 308 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 NFE2L1Q14494 772 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.57■□□□□ 0.4
CLK4-211ENST00000522556 ANKRD22Q5VYY1 191 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 USP53Q70EK8 1073 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 PROSER1Q86XN7 944 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 NXPE1Q8N323 547 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 LILRA3Q8N6C8 439 aaPredicted RBP17.57■□□□□ 0.4
CLK4-211ENST00000522556 OR6C4Q8NGE1 309 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 STYXQ8WUJ0 223 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 LRRC45Q96CN5 670 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 NXPE2Q96DL1 559 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 CDKN2AIPNLQ96HQ2 116 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 TMEM9Q9P0T7 183 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 ZNF624Q9P2J8 865 aaPredicted RBP17.57■□□□□ 0.4
CLK4-211ENST00000522556 SATB2Q9UPW6 733 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 NEU2Q9Y3R4 380 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 EPG5Q9HCE0 2579 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 DMXL2Q8TDJ6 3036 aa17.57■□□□□ 0.4
CLK4-211ENST00000522556 TRBV5-4A0A0C4DH59 114 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 CCDC162PA2VCL2 907 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 OR52A4PA6NMU1 304 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 H7C0S8 307 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 TLX3O43711 291 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms