RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CABS1Q96KC9 395 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 MYOCQ99972 504 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 EPHX3Q9H6B9 360 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 C6orf106Q9H6K1 298 aaPredicted RBP21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 TAS2R13Q9NYV9 303 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 INVSQ9Y283 1065 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 TMEM120BA0PK00 339 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 H3BMM5 538 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 K7ESF4 209 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 VPS26AO75436 327 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 FSBPO95073 299 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 ITGB6P18564 788 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 GMPRP36959 345 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 TIAL1Q01085 375 aaKnown RBP eCLIP21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 PDAP1Q13442 181 aaKnown RBP21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 KIAA0895LQ68EN5 471 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 MACC1Q6ZN28 852 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 HEATR4Q86WZ0 1026 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 APOPT1Q96IL0 206 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 SSU72Q9NP77 194 aaKnown RBP21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 SARS2Q9NP81 518 aaKnown RBP21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 SMG5Q9UPR3 1016 aaKnown RBP21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 ACOT9Q9Y305 439 aa21.13■□□□□ 0.97
R3HCC1-208ENST00000522012 AXIN1O15169 862 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 DNAJC6O75061 913 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 TRIM16O95361 564 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 OR56A5P0C7T3 313 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 SLC35E2BP0CK96 405 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 CCT5P48643 541 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 ATP1A2P50993 1020 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 IRF9Q00978 393 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 TMEM115Q12893 351 aaPredicted RBP21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 KDM7AQ6ZMT4 941 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 MAMSTRQ6ZN01 415 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 SPNS2Q8IVW8 549 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 ANKRD42Q8N9B4 389 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 KCNJ9Q92806 393 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 SGF29Q96ES7 293 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 GPR21Q99679 349 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 GPAMQ9HCL2 828 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 GALPQ9UBC7 116 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 MED16Q9Y2X0 877 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 OR1A2Q9Y585 309 aa21.12■□□□□ 0.97
R3HCC1-208ENST00000522012 A0A087X1B8 175 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 PRPF4O43172 522 aaKnown RBP eCLIP21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 TYROBPO43914 113 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 NDUFS2O75306 463 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 IGFALSP35858 605 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 CSRP3P50461 194 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 CCR5P51681 352 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 CDK3Q00526 305 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 ARFGAP2Q8N6H7 521 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 RASGEF1AQ8N9B8 481 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 SIDT2Q8NBJ9 832 aaKnown RBP21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 MDM1Q8TC05 714 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 LRFN3Q9BTN0 628 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 ZCCHC2Q9C0B9 1178 aaKnown RBP21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 IQCGQ9H095 443 aaKnown RBP21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 WDR26Q9H7D7 661 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 TRIM39Q9HCM9 518 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 DCDC2Q9UHG0 476 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 TRMT6Q9UJA5 497 aaKnown RBP21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 ANKRD6Q9Y2G4 727 aa21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 OAS3Q9Y6K5 1087 aaKnown RBP21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 ZNF106Q9H2Y7 1883 aaKnown RBP21.11■□□□□ 0.97
R3HCC1-208ENST00000522012 CDK14O94921 469 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 AP2A2O94973 939 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 ASMTLO95671 621 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 TOP3BO95985 862 aaKnown RBP21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 TEAD1P28347 426 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 CRHR1P34998 444 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 RPA3P35244 121 aaPredicted RBP21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 MPP2Q14168 576 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 UGT3A1Q6NUS8 523 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 ADGRG6Q86SQ4 1221 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 TBC1D1Q86TI0 1168 aaPredicted RBP21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 LKAAEAR1Q8TD35 194 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 COX14Q96I36 57 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 TSNARE1Q96NA8 513 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 LGR4Q9BXB1 951 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 TEX101Q9BY14 249 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 OR2AG1Q9H205 316 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 POPDC3Q9HBV1 291 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 NKIRAS1Q9NYS0 192 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 MBD1Q9UIS9 605 aaPredicted RBP21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 TMEM98Q9Y2Y6 226 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 HCN4Q9Y3Q4 1203 aa21.1■□□□□ 0.97
R3HCC1-208ENST00000522012 OR2AG2A6NM03 316 aa21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 FPGTO14772 594 aa21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 LATO43561 262 aa21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 IGHV4-34P06331 123 aa21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 HNRNPA2B1P22626 353 aaKnown RBP21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 AKT2P31751 481 aa21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 TRIM23P36406 574 aa21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 SKIV2L2P42285 1042 aaKnown RBP21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 CLDN2P57739 230 aa21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 GTF2H3Q13889 308 aa21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 SEPT7Q16181 437 aaKnown RBP21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 USP39Q53GS9 565 aaKnown RBP21.09■□□□□ 0.97
R3HCC1-208ENST00000522012 DOK6Q6PKX4 331 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms