RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 BEST1O76090 585 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 CAMTA2O94983 1202 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 PAPSS2O95340 614 aaPredicted RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 PPP1R3DO95685 299 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SNRNP70P08621 437 aaKnown RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 FAM106CPP0CH98 169 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 HNRNPCL4P0DMR1 293 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 MMP9P14780 707 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 POLR2CP19387 275 aaPredicted RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 IL11P20809 199 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 NR2F2P24468 414 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 CORO1AP31146 461 aaKnown RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 ACTN2P35609 894 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 IL15P40933 162 aaPredicted RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 HSD17B4P51659 736 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 TERF1P54274 439 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 GAS1P54826 345 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 MLLT10P55197 1068 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 PITX1P78337 314 aaPredicted RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 CDC16Q13042 620 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 KCTD2Q14681 263 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 NR1D2Q14995 579 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SF3B4Q15427 424 aaKnown RBP eCLIP2.97□□□□□ -1.937e-7■■■■□ 21.6
SKP1-203ENST00000517625 RAB6CQ53S08 254 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 CFAP58Q5T655 872 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 GPR139Q6DWJ6 353 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 CAPRIN2Q6IMN6 1127 aaKnown RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 GFRALQ6UXV0 394 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 TUBA1AQ71U36 451 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 Q75L30 129 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 ENOSF1Q7L5Y1 443 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 EXOC3L1Q86VI1 746 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.97□□□□□ -1.93
SKP1-203ENST00000517625 MINDY1Q8N5J2 469 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SLC5A8Q8N695 610 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SYT2Q8N9I0 419 aaPredicted RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 PAPD5Q8NDF8 572 aaKnown RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 RDM1Q8NG50 284 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 OR5R1Q8NH85 324 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 GSDMBQ8TAX9 411 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 UTP15Q8TED0 518 aaKnown RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 ZNF622Q969S3 477 aaKnown RBP eCLIP2.97□□□□□ -1.932e-20■□□□□ 9.4
SKP1-203ENST00000517625 SLC22A18Q96BI1 424 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SLC22A12Q96S37 553 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SMC6Q96SB8 1091 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 CSF3RQ99062 836 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 GAD1Q99259 594 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SEMA3CQ99985 751 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 TUBA1CQ9BQE3 449 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SRSF8Q9BRL6 282 aaKnown RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 SYT17Q9BSW7 474 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 RAB6CQ9H0N0 254 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 TMX4Q9H1E5 349 aaPredicted RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 MMP27Q9H306 513 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 RAD21L1Q9H4I0 556 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SLC35C2Q9NQQ7 365 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 PAG1Q9NWQ8 432 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 RPS6KA6Q9UK32 745 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 PADI1Q9ULC6 663 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 PCDHGB4Q9UN71 923 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 ZNF148Q9UQR1 794 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 WBP11Q9Y2W2 641 aaKnown RBP2.97□□□□□ -1.93
SKP1-203ENST00000517625 NME7Q9Y5B8 376 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 PCDHGB1Q9Y5G3 927 aa2.97□□□□□ -1.93
SKP1-203ENST00000517625 SAA2-SAA4A0A096LPE2 208 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 ZCWPW2A0A1B0GU75 182 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 C4orf47A7E2U8 309 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 HNRNPCL2B2RXH8 293 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 ZNF587BE7ETH6 402 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 ZNHIT1O43257 154 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 FIBPO43427 364 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 TIMM44O43615 452 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 WDR1O75083 606 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 ZNF217O75362 1048 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 PDE9AO76083 593 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 ZBTB11O95625 1053 aaPredicted RBP2.96□□□□□ -1.94
SKP1-203ENST00000517625 SELLP14151 372 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 TRIM21P19474 475 aaKnown RBP2.96□□□□□ -1.94
SKP1-203ENST00000517625 HRH2P25021 359 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 TNFRSF8P28908 595 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 TKTP29401 623 aaKnown RBP2.96□□□□□ -1.94
SKP1-203ENST00000517625 BRWD1-AS2P59051 145 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 PLIN5Q00G26 463 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 NUCB1Q02818 461 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 MEP1AQ16819 746 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 IZUMO4Q1ZYL8 232 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 GARNL3Q5VVW2 1013 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 WBP2NLQ6ICG8 309 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 KIAA1161Q6NSJ0 714 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 SPSB3Q6PJ21 355 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 C16orf54Q6UWD8 224 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 INTS8Q75QN2 995 aaKnown RBP2.96□□□□□ -1.94
SKP1-203ENST00000517625 ZNF534Q76KX8 674 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 MEPCEQ7L2J0 689 aaKnown RBP2.96□□□□□ -1.94
SKP1-203ENST00000517625 HAUS6Q7Z4H7 955 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 KBTBD6Q86V97 674 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 TMEM219Q86XT9 240 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 MAP7D3Q8IWC1 876 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 ZNF34Q8IZ26 560 aa2.96□□□□□ -1.94
SKP1-203ENST00000517625 RASGEF1CQ8N431 466 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms