RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CEP97Q8IW35 865 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 KCNN1Q92952 543 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ASIC4Q96FT7 647 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 REXO5Q96IC2 774 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ITCHQ96J02 903 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 CNDP2Q96KP4 475 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 OR52E6Q96RD3 313 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 EHD1Q9H4M9 534 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PCDH12Q9NPG4 1184 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 TMPRSS4Q9NRS4 437 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SPATA7Q9P0W8 599 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 FAM8A1Q9UBU6 413 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SLC2A6Q9UGQ3 507 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 U3KQV3 271 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 LOC100130705A0A1B0GUX0 176 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 YJEFN3A6XGL0 299 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CXCR6O00574 342 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF37AP17032 561 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 POLR2EP19388 210 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ALDH4A1P30038 563 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 MAGEA12P43365 314 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TUBA1BP68363 451 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 GRIK2Q13002 908 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 C1DQ13901 141 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 NPTX1Q15818 432 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TYSND1Q2T9J0 566 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 NHSL2Q5HYW2 709 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PDZK1Q5T2W1 519 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ANKRD26P1Q6NSI1 321 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TUBA1AQ71U36 451 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ABI1Q8IZP0 508 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ABHD11Q8NFV4 315 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TBC1D15Q8TC07 691 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TSGA13Q96PP4 275 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CGREF1Q99674 301 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 SEMA3CQ99985 751 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ABI2Q9NYB9 513 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 KLQ9UEF7 1012 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ATAD5Q96QE3 1844 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ISPDA4D126 451 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 NPEPPSL1A6NEC2 478 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 EFCAB9A8MZ26 197 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 LOC110117498-PIK3R3F6TDL0 507 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 EPN2O95208 641 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CPSF4O95639 269 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 GUCA1CO95843 209 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 EDN1P05305 212 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CNPP09543 421 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF7P17097 686 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ITGALP20701 1170 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 OR1E1P30953 314 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 MTPNP58546 118 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 COPZ1P61923 177 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TSNQ15631 228 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CYP2A13Q16696 494 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 MEP1AQ16819 746 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 USP41Q3LFD5 358 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 RNF111Q6ZNA4 994 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 USP43Q70EL4 1123 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 GALNT5Q7Z7M9 940 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TAC4Q86UU9 113 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 IGFN1Q86VF2 1251 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 BBS7Q8IWZ6 715 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 LPCAT1Q8NF37 534 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PIK3R3Q92569 461 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ERLEC1Q96DZ1 483 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TBATAQ96M53 351 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 NSMCE3Q96MG7 304 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 COQ7Q99807 217 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 FAM126AQ9BYI3 521 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 OSBPL2Q9H1P3 480 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 FBXO44Q9H4M3 255 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 AGO3Q9H9G7 860 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TRMT13Q9NUP7 481 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 GDAP2Q9NXN4 497 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CRLS1Q9UJA2 301 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ERVK-11Q9UQG0 969 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 HEMK1Q9Y5R4 338 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 SNX10Q9Y5X0 201 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 C17orf102A2RUQ5 167 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PSMD11O00231 422 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PLK4O00444 970 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TBX1O43435 398 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 SIX3O95343 332 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 GNAO1P09471 354 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 RRM2P31350 389 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PRIM2P49643 509 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CYP4F3Q08477 520 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 DNASE1L3Q13609 305 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CCDC85BQ15834 202 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CARTPTQ16568 116 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 OVOS1Q6IE37 1185 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TRNP1Q6NT89 227 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 DHRS4L2Q6PKH6 230 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 RPS27LQ71UM5 84 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 MIB1Q86YT6 1006 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 GLB1L3Q8NCI6 653 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 C19orf18Q8NEA5 215 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 DNAJB8Q8NHS0 232 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ENKURQ8TC29 256 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 764.3 ms