RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 VPS33AQ96AX1 596 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 MYEOVQ96EZ4 313 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 RPRD1AQ96P16 312 aaPredicted RBP6.6□□□□□ -1.35
CDH12-203ENST00000517378 PSKH2Q96QS6 385 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 MAGEH1Q9H213 219 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 NANOGQ9H9S0 305 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CXorf21Q9HAI6 301 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 TLR9Q9NR96 1032 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 MARCH2Q9P0N8 246 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CDC14AQ9UNH5 594 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 PCDHB5Q9Y5E4 795 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 SPO11Q9Y5K1 396 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 BRCA2P51587 3418 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 H7C0S8 307 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 SYN3O14994 580 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CRCPO75575 148 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 BAIAP3O94812 1187 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 ZDHHC11BP0C7U3 371 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 PRSS56P0CW18 603 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 PRDX3P30048 256 aaKnown RBP6.6□□□□□ -1.35
CDH12-203ENST00000517378 THPOP40225 353 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 KPNA1P52294 538 aaPredicted RBP6.6□□□□□ -1.35
CDH12-203ENST00000517378 HK3P52790 923 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 UFM1P61960 85 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 ECT2LQ008S8 904 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 PMS2P3Q13401 168 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 MRPL58Q14197 206 aaKnown RBP6.6□□□□□ -1.35
CDH12-203ENST00000517378 TRIM71Q2Q1W2 868 aaKnown RBP6.6□□□□□ -1.35
CDH12-203ENST00000517378 PYCR3Q53H96 274 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CTSL3PQ5NE16 218 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 C6orf136Q5SQH8 315 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 FAM117BQ6P1L5 589 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 C17orf99Q6UX52 265 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 DLEU7Q6UYE1 221 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CIR1Q86X95 450 aaPredicted RBP6.6□□□□□ -1.35
CDH12-203ENST00000517378 AADATQ8N5Z0 425 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 KLHDC9Q8NEP7 349 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 DNAJB14Q8TBM8 379 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CD200R1Q8TD46 325 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CYGBQ8WWM9 190 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 KCNJ9Q92806 393 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 BIRC7Q96CA5 298 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 SPATA17Q96L03 361 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 FAM210AQ96ND0 272 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 RDH12Q96NR8 316 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 GPR21Q99679 349 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH12-203ENST00000517378 CCDC68Q9H2F9 335 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 TLR8Q9NR97 1041 aaKnown RBP6.6□□□□□ -1.35
CDH12-203ENST00000517378 LMCD1Q9NZU5 365 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 SEPT3Q9UH03 358 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 TIMM22Q9Y584 194 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 BTN3A1O00481 513 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 ANKRD28O15084 1053 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 TPST1O60507 370 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 VPS26AO75436 327 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 ATE1O95260 518 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 PRLP01236 227 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 NCK1P16333 377 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 TACR2P21452 398 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 JAK1P23458 1154 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 HMOX2P30519 316 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 FMO4P31512 558 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 GRK4P32298 578 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 AGTR2P50052 363 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 GALK1P51570 392 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 TMBIM6P55061 237 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 PRKG2Q13237 762 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 PCBP2Q15366 365 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDH12-203ENST00000517378 SDHAF4Q5VUM1 108 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 UGT3A1Q6NUS8 523 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 ZNF773Q6PK81 442 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 GLT6D1Q7Z4J2 308 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 SMYD1Q8NB12 490 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 MDGA1Q8NFP4 955 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 OR4K2Q8NGD2 314 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 OR8J3Q8NGG0 315 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 OR52E4Q8NGH9 312 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 OR13F1Q8NGS4 319 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 FBXO32Q969P5 355 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 PDLIM5Q96HC4 596 aaKnown RBP6.59□□□□□ -1.35
CDH12-203ENST00000517378 NSMCE3Q96MG7 304 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 HGH1Q9BTY7 390 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 TDRD1Q9BXT4 1180 aaKnown RBP6.59□□□□□ -1.35
CDH12-203ENST00000517378 ACTL8Q9H568 366 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 NTN4Q9HB63 628 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 PALMDQ9NP74 551 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 INTS7Q9NVH2 962 aaKnown RBP6.59□□□□□ -1.35
CDH12-203ENST00000517378 FAIMQ9NVQ4 179 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 DNAAF2Q9NVR5 837 aaKnown RBP6.59□□□□□ -1.35
CDH12-203ENST00000517378 NUDT4Q9NZJ9 180 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 PKD2L2Q9NZM6 624 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 SUN2Q9UH99 717 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 FAM50BQ9Y247 325 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 PCDHGA11Q9Y5H2 935 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 HEMK1Q9Y5R4 338 aaPredicted RBP6.59□□□□□ -1.35
CDH12-203ENST00000517378 PLXNA4Q9HCM2 1894 aa6.59□□□□□ -1.35
CDH12-203ENST00000517378 UBA6A0AVT1 1052 aaPredicted RBP6.59□□□□□ -1.35
CDH12-203ENST00000517378 H3BNC9 293 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms