RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PPM1FP49593 454 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZBED6P86452 979 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RUNX1T1Q06455 604 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PTP4A2Q12974 167 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TUBB2AQ13885 445 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CCNG2Q16589 344 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PNLIPRP3Q17RR3 467 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 DPCR1Q3MIW9 517 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FFAR4Q5NUL3 377 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NDUFAF5Q5TEU4 345 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TRIM65Q6PJ69 517 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 METTL7BQ6UX53 244 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CYP26C1Q6V0L0 522 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MFSD6Q6ZSS7 791 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FASTKD5Q7L8L6 764 aaKnown RBP2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SLC5A8Q8N695 610 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RBM15BQ8NDT2 890 aaKnown RBP2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HM13Q8TCT9 377 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MRGPRDQ8TDS7 321 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 POM121L2Q96KW2 1035 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MCRIP2Q9BUT9 160 aaKnown RBP2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TUBB2BQ9BVA1 445 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TMEM39BQ9GZU3 492 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SLC25A18Q9H1K4 315 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MAGIXQ9H6Y5 334 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SLC7A10Q9NS82 523 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CWC15Q9P013 229 aaKnown RBP2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 COPG2Q9UBF2 871 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GJD2Q9UKL4 321 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CYP46A1Q9Y6A2 500 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 STK36Q9NRP7 1315 aa2.59□□□□□ -2
RNU6-1088P-201ENST00000516850 A0A1W2PP11 408 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 A0A1W2PRG0 241 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 MEIOCA2RUB1 952 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 PLOD2O00469 737 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 HOXC11O43248 304 aaPredicted RBP2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 DCXO43602 365 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 SLC25A12O75746 678 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 EML2O95834 649 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 F9P00740 461 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 TSHBP01222 138 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 LIPFP07098 398 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 CEACAM1P13688 526 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 ITGA3P26006 1051 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 CTSCP53634 463 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 LRMPQ12912 555 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 BIRC3Q13489 604 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 FRG1Q14331 258 aaKnown RBP2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 CXorf66Q5JRM2 361 aaPredicted RBP2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 CCDC190Q86UF4 302 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 ARMC8Q8IUR7 673 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 ZNF440Q8IYI8 595 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 PM20D2Q8IYS1 436 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 SPAG16Q8N0X2 631 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 PPHLN1Q8NEY8 458 aaKnown RBP2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 TMEM143Q96AN5 459 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 FAM149B1Q96BN6 582 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 RHNO1Q9BSD3 238 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 PDCL3Q9H2J4 239 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 PCDHB16Q9NRJ7 776 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 PTTG2Q9NZH5 202 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 PAK5Q9P286 719 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 KLHL9Q9P2J3 617 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 CACNG5Q9UF02 275 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 RASAL2Q9UJF2 1139 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 MKLN1Q9UL63 735 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 ARHGAP26Q9UNA1 814 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 YIPF1Q9Y548 306 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 DGKBQ9Y6T7 804 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 FLT1P17948 1338 aa2.58□□□□□ -2
RNU6-1088P-201ENST00000516850 IGKV6D-41A0A0C4DH26 115 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 SLCO1B7G3V0H7 640 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 IFRD1O00458 451 aaPredicted RBP2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 ZBTB43O43298 467 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 TNFSF14O43557 240 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 SYNCRIPO60506 623 aaKnown RBP2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 SEC14L2O76054 403 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 CLPTM1O96005 669 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 ABCD3P28288 659 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 EPHA2P29317 976 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 KRT2P35908 639 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 MAPK9P45984 424 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 BMXP51813 675 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 CD81P60033 236 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 SNRPD1P62314 119 aaKnown RBP2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 SPOCK1Q08629 439 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 GOLGA8DPQ0D2H9 430 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 NAB2Q15742 525 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 PRICKLE4Q2TBC4 344 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 GTDC1Q4AE62 458 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 ZNF805Q5CZA5 627 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 SH2D6Q7Z4S9 175 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 SDCCAG8Q86SQ7 713 aaPredicted RBP2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 P2RY8Q86VZ1 359 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 ZNF354CQ86Y25 554 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 NGEFQ8N5V2 710 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 GCSAMQ8N6F7 178 aa2.57□□□□□ -2
RNU6-1088P-201ENST00000516850 C1orf52Q8N6N3 182 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms