RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 BMP2KLQ5H9B9 411 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 NADSYN1Q6IA69 706 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 PRSS57Q6UWY2 283 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF517Q6ZMY9 492 aaPredicted RBP5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 Q75L30 129 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 TMPRSS12Q86WS5 348 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 GALNT13Q8IUC8 556 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 PM20D2Q8IYS1 436 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 EMC1Q8N766 993 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 LSMEM1Q8N8F7 131 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 THAP6Q8TBB0 222 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 UTP15Q8TED0 518 aaKnown RBP5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 FIG4Q92562 907 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 MOAP1Q96BY2 351 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 BICD1Q96G01 975 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 THOC3Q96J01 351 aaKnown RBP5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 DACH2Q96NX9 599 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF385AQ96PM9 386 aaKnown RBP5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 SERINC2Q96SA4 455 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 SLF1Q9BQI6 1058 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 HGH1Q9BTY7 390 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 KIFC3Q9BVG8 833 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 RAB6CQ9H0N0 254 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 RAD21L1Q9H4I0 556 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 KLHL9Q9P2J3 617 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 NRBP1Q9UHY1 535 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 OR2W1Q9Y3N9 320 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 PCDHGA5Q9Y5G8 931 aa5.01□□□□□ -1.61
HMGCS1-207ENST00000514610 LOC102723996A0A087X1L8 192 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 LILRA5A6NI73 299 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 GLOD5A6NK44 160 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 HNRNPCL2B2RXH8 293 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 TMEM189-UBE2V1I3L0A0 370 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 J3QR06 171 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 P4HA2O15460 535 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 LDB3O75112 727 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 WISP2O76076 250 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 CAMTA2O94983 1202 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 GH2P01242 217 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 KCNA5P22460 613 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 NMBRP28336 390 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 STAT2P52630 851 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 ART1P52961 327 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 RRP1P56182 461 aaKnown RBP5□□□□□ -1.61
HMGCS1-207ENST00000514610 NUCB1Q02818 461 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 UBE2V1Q13404 147 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 GRAPQ13588 217 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 IGSF11Q5DX21 431 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 KRT79Q5XKE5 535 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF324BQ6AW86 544 aaPredicted RBP5□□□□□ -1.61
HMGCS1-207ENST00000514610 TPRG1Q6ZUI0 275 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF534Q76KX8 674 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 MAP7D3Q8IWC1 876 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 RNF113BQ8IZP6 322 aaKnown RBP5□□□□□ -1.61
HMGCS1-207ENST00000514610 OR8H2Q8N162 312 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 TMTC2Q8N394 836 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 GCSAMQ8N6F7 178 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 BBS10Q8TAM1 723 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 NKIRAS2Q9NYR9 191 aa5□□□□□ -1.61
HMGCS1-207ENST00000514610 MAGED1Q9Y5V3 778 aaPredicted RBP5□□□□□ -1.61
HMGCS1-207ENST00000514610 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 MAGEA13PA6NCF6 341 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 AVILO75366 819 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 DAOP14920 347 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 SLC39A14Q15043 492 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 MEP1AQ16819 746 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 KIF19Q2TAC6 998 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 GARNL3Q5VVW2 1013 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 MEPCEQ7L2J0 689 aaKnown RBP4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 ADGRA1Q86SQ6 560 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 DNAAF5Q86Y56 855 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 LMO3Q8TAP4 145 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 PTPMT1Q8WUK0 201 aaPredicted RBP4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 ERP27Q96DN0 273 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 GCNAQ96QF7 691 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 RTN4RQ9BZR6 473 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 KLHL4Q9C0H6 718 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 OSGEPL1Q9H4B0 414 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 DDX31Q9H8H2 851 aaKnown RBP4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 TAS2R14Q9NYV8 317 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 SELENONQ9NZV5 590 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 VDAC3Q9Y277 283 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 TTLL3Q9Y4R7 772 aa4.99□□□□□ -1.61
HMGCS1-207ENST00000514610 CGNL1Q0VF96 1302 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF644Q9H582 1327 aaPredicted RBP4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 PRAG1Q86YV5 1406 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 TMEM178BH3BS89 294 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 PLK4O00444 970 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 TIMM44O43615 452 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 CREG1O75629 220 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 CCKARP32238 428 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 CD81P60033 236 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF234Q14588 700 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 FAM98BQ52LJ0 330 aaKnown RBP4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 TRNP1Q6NT89 227 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 ASB18Q6ZVZ8 466 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 PRPF39Q86UA1 669 aaKnown RBP4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 MINDY1Q8N5J2 469 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 SLC5A8Q8N695 610 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms