RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ILKQ13418 452 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 TMEM220Q6QAJ8 160 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 DET1Q7L5Y6 550 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 RAB44Q7Z6P3 723 aaPredicted RBP13.76□□□□□ -0.21
USP46-209ENST00000514536 CAND1Q86VP6 1230 aaKnown RBP13.76□□□□□ -0.21
USP46-209ENST00000514536 TRAPPC5Q8IUR0 188 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 PPIL6Q8IXY8 311 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 PIANPQ8IYJ0 282 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 NXPE1Q8N323 547 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 NAT8LQ8N9F0 302 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 NAT14Q8WUY8 206 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 ZNF592Q92610 1267 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 SGF29Q96ES7 293 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 DNAJC16Q9Y2G8 782 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 COL5A1P20908 1838 aaPredicted RBP13.76□□□□□ -0.21
USP46-209ENST00000514536 LRP4O75096 1905 aa13.76□□□□□ -0.21
USP46-209ENST00000514536 TRBV5-4A0A0C4DH59 114 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 OR2AG2A6NM03 316 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 DNALI1O14645 258 aaPredicted RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 TTI1O43156 1089 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 SNX2O60749 519 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 SPINK2P20155 84 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 NMBRP28336 390 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 B4GALNT1Q00973 533 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 INSCQ1MX18 579 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 PERM1Q5SV97 790 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 RNASEH2BQ5TBB1 312 aaKnown RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 CES3Q6UWW8 571 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 SYDE1Q6ZW31 735 aaPredicted RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 SERPINA9Q86WD7 417 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 JAMLQ86YT9 394 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 NAGSQ8N159 534 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 SPATA4Q8NEY3 305 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 OR6P1Q8NGX9 317 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 PATE1Q8WXA2 126 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 CCDC97Q96F63 343 aaPredicted RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 DCUN1D1Q96GG9 259 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 COPS8Q99627 209 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 TRIM51Q9BSJ1 452 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 OSGEPL1Q9H4B0 414 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 TBC1D29Q9UFV1 150 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 SCN8AQ9UQD0 1980 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 SDR42E2A6NKP2 422 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 POP7O75817 140 aaKnown RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 URI1O94763 535 aaPredicted RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 EML2O95834 649 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 GOT2P00505 430 aaKnown RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 RALBP11234 206 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 CDK4P11802 303 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 MLNP12872 115 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 IVDP26440 423 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 FOXN2P32314 431 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 MAZP56270 477 aaKnown RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 CLDN6P56747 220 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 PRAMEP78395 509 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 MRPS25P82663 173 aaKnown RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 E2F1Q01094 437 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 ACVR1Q04771 509 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 C2orf54Q08AI8 447 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 HLTFQ14527 1009 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP46-209ENST00000514536 C14orf28Q4W4Y0 310 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 FNBP1LQ5T0N5 605 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 IZUMO3Q5VZ72 239 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 AFTPHQ6ULP2 937 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 C11orf96Q7Z7L8 435 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 MPP5Q8N3R9 675 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 NAT6Q93015 286 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 SERPINB12Q96P63 405 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 KIFC1Q9BW19 673 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 SCNM1Q9BWG6 230 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 ABCG4Q9H172 646 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 XAB2Q9HCS7 855 aaKnown RBP13.75□□□□□ -0.21
USP46-209ENST00000514536 PRDM8Q9NQV8 689 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 ZDHHC3Q9NYG2 299 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 WASF3Q9UPY6 502 aa13.75□□□□□ -0.21
USP46-209ENST00000514536 CFAP99D6REC4 459 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 OPA1O60313 960 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 KRT37O76014 449 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 GP1BAP07359 652 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 ATP1B2P14415 290 aaPredicted RBP13.74□□□□□ -0.21
USP46-209ENST00000514536 ACRV1P26436 265 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 CLCNKAP51800 687 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 DHX34Q14147 1143 aaKnown RBP13.74□□□□□ -0.21
USP46-209ENST00000514536 DBN1Q16643 649 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 CASC4Q6P4E1 433 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 PCGF5Q86SE9 256 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 C17orf82Q86X59 251 aaPredicted RBP13.74□□□□□ -0.21
USP46-209ENST00000514536 ARL14Q8N4G2 192 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
USP46-209ENST00000514536 OR6C4Q8NGE1 309 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 OR4L1Q8NH43 312 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 MAPK15Q8TD08 544 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 HEXDCQ8WVB3 486 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 PEX13Q92968 403 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 CCDC74AQ96AQ1 378 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 MFSD3Q96ES6 412 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 TIMM29Q9BSF4 260 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 TRIM31Q9BZY9 425 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 TREX1Q9NSU2 369 aa13.74□□□□□ -0.21
USP46-209ENST00000514536 LRIT1Q9P2V4 623 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms