RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ERVMER34-1Q9H9K5 563 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 SAYSD1Q9NPB0 183 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 CATSPERZQ9NTU4 200 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 ZDHHC18Q9NUE0 388 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 SMOXQ9NWM0 555 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC17A4Q9Y2C5 497 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 GPSM3Q9Y4H4 160 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 ST14Q9Y5Y6 855 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 SPEGQ15772 3267 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 TRBV5-4A0A0C4DH59 114 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 ZCWPW2A0A1B0GU75 182 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 FAM237BA0A1B0GVD1 139 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 TOR1BO14657 336 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 OR1I1O60431 355 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 DNAJC6O75061 913 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 PIAS1O75925 651 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 TNFP01375 233 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 IVLP07476 585 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 HOXC4P09017 264 aaPredicted RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 CTSEP14091 401 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 MSH3P20585 1137 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 DGKAP23743 735 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 ACRV1P26436 265 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 ARCN1P48444 511 aaKnown RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 ARRB1P49407 418 aaPredicted RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 LAMB3Q13751 1172 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 GTF2H3Q13889 308 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 TUSC1Q2TAM9 212 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 DEFB133Q30KQ1 61 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 FASTKD1Q53R41 847 aaKnown RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 KIAA0930Q6ICG6 404 aaPredicted RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 TRMT10BQ6PF06 316 aaKnown RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC30A9Q6PML9 568 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 UNC5AQ6ZN44 842 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 NLRP9Q7RTR0 991 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 KANSL1Q7Z3B3 1105 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 DCP2Q8IU60 420 aaKnown RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF547Q8IVP9 402 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 CLDN19Q8N6F1 224 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 OR4L1Q8NH43 312 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 SAP25Q8TEE9 199 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 ULK4Q96C45 1275 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 C9orf72Q96LT7 481 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 COPS8Q99627 209 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 EBNA1BP2Q99848 306 aaKnown RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC13A1Q9BZW2 595 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 TRIM39Q9HCM9 518 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 RRAGDQ9NQL2 400 aaPredicted RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 C20orf96Q9NUD7 363 aaPredicted RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 DNAAF2Q9NVR5 837 aaKnown RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 ZC3H7BQ9UGR2 993 aaKnown RBP9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNHIT2Q9UHR6 403 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 RIMKLBQ9ULI2 386 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 KCNK6Q9Y257 313 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 DNAJC16Q9Y2G8 782 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 TEX264Q9Y6I9 313 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 PRSS21Q9Y6M0 314 aa9.68□□□□□ -0.86
TOPBP1-209ENST00000513818 AGAP14A8MT82 685 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 E7ESA3 106 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SMAPO00193 183 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 NDC80O14777 642 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 CD3EAPO15446 510 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 AQP9O43315 295 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 GRID2O43424 1007 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SGTAO43765 313 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SH3BP5O60239 455 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 NUAK1O60285 661 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 USP1O94782 785 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 CDK14O94921 469 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SLU7O95391 586 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 GIMD1P0DJR0 217 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 ERVK-10P10266 1014 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 CD59P13987 128 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF16P17020 682 aaPredicted RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 ITGB6P18564 788 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 ABCG1P45844 678 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 RXRGP48443 463 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 HNRNPKP61978 463 aaKnown RBP eCLIP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 MPP1Q00013 466 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 TMEM115Q12893 351 aaPredicted RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 INSCQ1MX18 579 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 GLE1Q53GS7 698 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 PYCR3Q53H96 274 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 LDLRAP1Q5SW96 308 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF470Q6ECI4 717 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 TMEM220Q6QAJ8 160 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 DNAJC14Q6Y2X3 702 aaPredicted RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 CENPUQ71F23 418 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 CHST15Q7LFX5 561 aaPredicted RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 TMEM135Q86UB9 458 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 NRROSQ86YC3 692 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 DENND6AQ8IWF6 608 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC25A45Q8N413 288 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 EID2Q8N6I1 236 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 LKAAEAR1Q8TD35 194 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SETD7Q8WTS6 366 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SEC14L1Q92503 715 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SGF29Q96ES7 293 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 DCUN1D1Q96GG9 259 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms